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IMGVR_UViG_3300005099_000205-3300005099-Ga0072682_10918726
Arc-VirIMGVR_UViG_3300005099_000205-3300005099-Ga0072682_10918726
Identity
- Kingdom:
- archaea
Quality
86.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-72
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.78 | 57.0 | 5.39e-01 | 95.8% | 64.7% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 46.0 | 5.21e-01 | 88.7% | 100.0% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.68 | 53.0 | 5.56e-01 | 88.7% | 95.2% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 57.0 | 5.62e-01 | 98.6% | 89.2% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.66 | 50.0 | 4.16e-01 | 100.0% | 46.8% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 58.0 | 5.12e-01 | 100.0% | 68.6% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 46.0 | 4.81e-01 | 95.8% | 85.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 51.0 | 5.40e-01 | 95.8% | 98.4% |
| 1ub4A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 55.0 | 4.90e-01 | 97.2% | 79.6% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.62 | 51.0 | 4.36e-01 | 93.0% | 57.8% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 53.0 | 4.40e-01 | 100.0% | 70.0% |
| 4k8wA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.59 | 51.0 | 4.40e-01 | 100.0% | 86.4% |
| 6l4cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 39.0 | 2.88e-01 | 100.0% | 26.6% |
| 3htnB00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.57 | 50.0 | 4.08e-01 | 100.0% | 64.0% |
| 2bonA02 | 2.60.200.40 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 48.0 | 3.84e-01 | 97.2% | 81.9% |
| 1txoB00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.56 | 38.0 | 2.70e-01 | 70.4% | 95.8% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 38.0 | 2.84e-01 | 100.0% | 28.1% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 3.46e-01 | 83.1% | 71.4% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 39.0 | 4.02e-01 | 88.7% | 87.9% |
| 1y5lA02 | 3.40.50.12440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 2.46e-01 | 100.0% | 12.3% |
| 7nz1G01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.51 | 39.0 | 3.61e-01 | 95.8% | 62.5% |
| 2yvlA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.51 | 38.0 | 4.07e-01 | 100.0% | 96.6% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 42.0 | 4.32e-01 | 98.6% | 100.0% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029405 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.83 | 57.0 | 6.42e-01 | 90.1% | 92.7% |
| 4963111 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.81 | 51.0 | 6.13e-01 | 88.7% | 100.0% |
| 4957377 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.81 | 53.0 | 5.64e-01 | 90.1% | 76.2% |
| 5064457 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.80 | 53.0 | 5.36e-01 | 90.1% | 68.6% |
| 3308604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.80 | 64.0 | 6.31e-01 | 95.8% | 80.0% |
| 5056826 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.79 | 60.0 | 6.27e-01 | 95.8% | 87.7% |
| 5036621 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 55.0 | 6.16e-01 | 94.4% | 96.4% |
| 4540843 | 4.1.1.434 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2642 | 0.77 | 59.0 | 6.13e-01 | 95.8% | 87.7% |
| 5058457 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.77 | 61.0 | 6.40e-01 | 95.8% | 92.3% |
| 5081442 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.77 | 61.0 | 6.15e-01 | 95.8% | 85.7% |
| 139950 | 4.1.1.126 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5608 | 0.77 | 54.0 | 5.97e-01 | 95.8% | 94.6% |
| 4422251 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.76 | 51.0 | 5.99e-01 | 94.4% | 100.0% |
| 3267329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 58.0 | 4.81e-01 | 100.0% | 47.2% |
| 4321173 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.75 | 55.0 | 5.98e-01 | 98.6% | 94.8% |
| 4999430 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.74 | 59.0 | 4.92e-01 | 100.0% | 50.8% |
| 5057445 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.74 | 55.0 | 5.23e-01 | 98.6% | 65.9% |
| 5036592 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.74 | 61.0 | 6.02e-01 | 95.8% | 84.0% |
| 3514970 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 55.0 | 5.13e-01 | 98.6% | 64.4% |
| 3612184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 52.0 | 5.62e-01 | 95.8% | 90.0% |
| 5061147 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 64.0 | 5.77e-01 | 97.2% | 76.8% |
| 3485965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 52.0 | 5.62e-01 | 94.4% | 90.0% |
| 3300074 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 51.0 | 5.70e-01 | 91.5% | 98.1% |
| 3828348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 53.0 | 5.47e-01 | 97.2% | 84.6% |
| 3617111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 53.0 | 4.93e-01 | 100.0% | 62.2% |
| 3492557 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.72 | 59.0 | 5.25e-01 | 95.8% | 63.0% |
| 3645373 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 56.0 | 4.49e-01 | 100.0% | 43.7% |
| 5037939 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.72 | 58.0 | 4.48e-01 | 100.0% | 40.0% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.72 | 57.0 | 4.97e-01 | 100.0% | 56.4% |
| 4954224 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.71 | 65.0 | 5.84e-01 | 100.0% | 86.3% |
| 3389175 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 53.0 | 4.95e-01 | 100.0% | 63.3% |
| 3707347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 51.0 | 5.60e-01 | 94.4% | 96.4% |
| 3326132 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 53.0 | 5.48e-01 | 100.0% | 86.2% |
| 3866038 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.71 | 51.0 | 4.84e-01 | 95.8% | 63.5% |
| 3465976 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 51.0 | 5.35e-01 | 97.2% | 83.1% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.71 | 57.0 | 5.33e-01 | 100.0% | 70.0% |
| 3356591 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 55.0 | 5.02e-01 | 100.0% | 64.2% |
| 3429682 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 49.0 | 4.90e-01 | 95.8% | 70.7% |
| 3922679 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.69 | 47.0 | 5.38e-01 | 90.1% | 100.0% |
| 4075769 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.69 | 50.0 | 5.49e-01 | 95.8% | 98.2% |
| 3433070 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 51.0 | 5.20e-01 | 98.6% | 81.2% |
| 3408592 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 51.0 | 4.55e-01 | 98.6% | 57.0% |
| 3622052 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 51.0 | 4.84e-01 | 100.0% | 68.2% |
| 3709896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 60.0 | 5.66e-01 | 100.0% | 91.8% |
| 4014330 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 59.0 | 4.18e-01 | 98.6% | 40.0% |
| 3923766 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 57.0 | 4.86e-01 | 95.8% | 76.5% |
| 3824699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 53.0 | 5.52e-01 | 98.6% | 95.4% |
| 4018672 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.65 | 57.0 | 4.87e-01 | 98.6% | 75.7% |
| 3935042 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.65 | 54.0 | 4.68e-01 | 91.5% | 67.3% |
| 3586953 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 52.0 | 5.43e-01 | 95.8% | 96.9% |
| 1323508 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.64 | 56.0 | 4.56e-01 | 100.0% | 73.9% |
| 3259547 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 56.0 | 4.74e-01 | 98.6% | 81.7% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.62 | 54.0 | 5.37e-01 | 97.2% | 93.3% |
| 3721062 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.62 | 55.0 | 5.22e-01 | 100.0% | 97.6% |
| 3935469 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.62 | 50.0 | 5.11e-01 | 97.2% | 91.4% |
| 4349826 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.61 | 49.0 | 4.35e-01 | 85.9% | 94.0% |
| 1826911 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 51.0 | 4.81e-01 | 93.0% | 75.9% |
| 3313732 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.61 | 52.0 | 4.43e-01 | 98.6% | 61.7% |
| 3959440 | 4.1.1.180 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3107 | 0.57 | 44.0 | 4.55e-01 | 84.5% | 95.4% |
| 3199544 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 42.0 | 4.01e-01 | 84.5% | 85.6% |
| 3790010 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 47.0 | 4.27e-01 | 100.0% | 72.0% |
| 3690017 | 4.1.1.72 ↗ | beta barrels › SH3 › SH3 › SH3 › Hva1_TUDOR | 0.55 | 47.0 | 4.31e-01 | 98.6% | 90.4% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.52 | 45.0 | 4.52e-01 | 100.0% | 97.3% |
| 3504500 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.52 | 45.0 | 4.17e-01 | 100.0% | 92.6% |
| 3501491 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 42.0 | 3.50e-01 | 94.4% | 80.7% |
| 4055193 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.51 | 44.0 | 4.08e-01 | 100.0% | 87.4% |
| 3253077 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 41.0 | 3.35e-01 | 88.7% | 68.9% |
| 4952902 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 42.0 | 3.70e-01 | 100.0% | 85.0% |
| 4125814 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.51 | 43.0 | 4.24e-01 | 100.0% | 90.7% |
| 3267853 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.50 | 43.0 | 3.12e-01 | 100.0% | 41.4% |