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IMGVR_UViG_3300005220_000012-3300005220-Ga0073352_13293
Arc-VirIMGVR_UViG_3300005220_000012-3300005220-Ga0073352_13293
Identity
- Kingdom:
- archaea
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-141
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6fyqA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 44.0 | 3.98e-01 | 75.4% | 65.3% |
| 3madA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 43.0 | 4.32e-01 | 73.1% | 73.3% |
| 3tgxB00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.59 | 34.0 | 3.63e-01 | 91.5% | 62.6% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 50.0 | 4.70e-01 | 97.7% | 78.3% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 43.0 | 4.18e-01 | 81.5% | 95.3% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.56 | 34.0 | 3.87e-01 | 100.0% | 81.1% |
| 5bn3A04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.55 | 36.0 | 3.57e-01 | 80.8% | 61.2% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 38.0 | 3.68e-01 | 70.0% | 97.9% |
| 3fo5B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 44.0 | 3.66e-01 | 85.4% | 97.0% |
| 5jfqB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 38.0 | 2.91e-01 | 71.5% | 44.1% |
| 2ch1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 43.0 | 4.27e-01 | 84.6% | 79.9% |
| 4akgA11 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.54 | 42.0 | 3.30e-01 | 82.3% | 64.1% |
| 2opiA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.54 | 43.0 | 3.75e-01 | 86.2% | 90.1% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.53 | 36.0 | 3.81e-01 | 100.0% | 76.1% |
| 2r6iA02 | 1.10.3580.10 | Mainly Alpha › Orthogonal Bundle › ATP12-like fold › ATP12 ATPase | 0.53 | 46.0 | 4.30e-01 | 100.0% | 91.9% |
| 3cueB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.52 | 36.0 | 3.32e-01 | 70.8% | 82.0% |
| 1efdN02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.51 | 37.0 | 3.40e-01 | 74.6% | 88.9% |
| 3fkdA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 35.0 | 3.77e-01 | 70.8% | 83.9% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.51 | 30.0 | 3.51e-01 | 82.3% | 84.4% |
| 1lc5A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 37.0 | 3.77e-01 | 73.8% | 77.6% |
| 2e3nA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 41.0 | 3.40e-01 | 86.2% | 86.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081640 | 235.1.1.45 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_108 | 0.65 | 49.0 | 4.35e-01 | 84.6% | 55.6% |
| 3578125 | 3016.1.1.4 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Pyridoxal_deC | 0.61 | 44.0 | 4.45e-01 | 74.6% | 80.0% |
| 3604551 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.58 | 46.0 | 4.26e-01 | 86.2% | 86.5% |
| 3802135 | 192.29.1.27 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF1218 | 0.57 | 46.0 | 4.23e-01 | 85.4% | 87.3% |
| 4596504 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.56 | 43.0 | 3.84e-01 | 98.5% | 55.8% |
| 3386345 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.56 | 34.0 | 3.96e-01 | 100.0% | 85.6% |
| 4950368 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.55 | 46.0 | 4.37e-01 | 89.2% | 92.9% |
| 4997298 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.55 | 40.0 | 4.05e-01 | 73.8% | 75.0% |
| 3598725 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.55 | 47.0 | 4.13e-01 | 90.8% | 89.9% |
| 3593313 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.55 | 46.0 | 4.10e-01 | 91.5% | 92.1% |
| 5035483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.54 | 32.0 | 2.90e-01 | 87.7% | 43.5% |
| 4018540 | 630.1.1.0 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain | 0.54 | 38.0 | 3.52e-01 | 71.5% | 95.2% |
| 3615220 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 45.0 | 4.10e-01 | 90.8% | 93.1% |
| 3647550 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.54 | 31.0 | 3.73e-01 | 84.6% | 87.1% |
| 3701133 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 45.0 | 3.95e-01 | 91.5% | 94.0% |
| 3229069 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.53 | 45.0 | 3.89e-01 | 93.8% | 91.0% |
| 5009082 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.53 | 37.0 | 4.14e-01 | 71.5% | 95.0% |
| 3628972 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.53 | 45.0 | 3.86e-01 | 93.1% | 90.5% |
| 3992906 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.53 | 45.0 | 3.74e-01 | 93.1% | 87.4% |
| 3600254 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 45.0 | 3.99e-01 | 92.3% | 95.1% |
| 5072257 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 38.0 | 4.29e-01 | 84.6% | 98.0% |
| 3609092 | 633.23.1.23 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin | 0.53 | 44.0 | 3.99e-01 | 90.8% | 93.7% |
| 4634499 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.53 | 26.0 | 3.56e-01 | 80.0% | 100.0% |
| 3595430 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 43.0 | 3.75e-01 | 89.2% | 92.5% |
| 4609138 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.52 | 40.0 | 3.87e-01 | 89.2% | 70.7% |
| 3936161 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.52 | 44.0 | 3.77e-01 | 93.1% | 83.7% |
| 3254057 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.52 | 41.0 | 3.67e-01 | 86.9% | 94.4% |
| 1115806 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 37.0 | 4.22e-01 | 77.7% | 100.0% |
| 3630405 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.51 | 43.0 | 3.67e-01 | 92.3% | 90.0% |
| 3911662 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.51 | 43.0 | 3.71e-01 | 90.8% | 82.9% |
| 3518485 | 633.23.1.5 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like | 0.51 | 43.0 | 3.81e-01 | 92.3% | 91.8% |
| 4956663 | 3291.1.1.49 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › NFACT_N | 0.51 | 31.0 | 3.16e-01 | 87.7% | 61.6% |
| 5032062 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.51 | 44.0 | 3.97e-01 | 96.2% | 88.3% |
| 3765561 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.50 | 42.0 | 3.52e-01 | 93.1% | 73.2% |