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IMGVR_UViG_3300005223_000020-3300005223-Ga0073350_1231257

Arc-Vir

IMGVR_UViG_3300005223_000020-3300005223-Ga0073350_1231257

Quality

71.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-62
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l66A00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.55 28.0 2.99e-01 78.3% 49.1%
1tzfA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.50 39.0 2.70e-01 91.7% 91.2%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.50 40.0 3.37e-01 96.7% 60.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943819 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.53 27.0 3.16e-01 78.3% 67.5%
3171242 221.1.1.199 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF29076 0.51 41.0 3.17e-01 100.0% 42.9%
4148115 2005.1.1.23 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.51 42.0 2.97e-01 98.3% 82.7%
3723257 5042.1.1.0 extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region 0.50 34.0 3.08e-01 70.0% 56.5%
3739576 327.11.2.27 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin 0.50 31.0 3.19e-01 93.3% 63.6%