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IMGVR_UViG_3300005223_000020-3300005223-Ga0073350_1231257
Arc-VirIMGVR_UViG_3300005223_000020-3300005223-Ga0073350_1231257
Identity
- Kingdom:
- archaea
Quality
71.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-62
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l66A00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.55 | 28.0 | 2.99e-01 | 78.3% | 49.1% |
| 1tzfA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 39.0 | 2.70e-01 | 91.7% | 91.2% |
| 2jhjA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.50 | 40.0 | 3.37e-01 | 96.7% | 60.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943819 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.53 | 27.0 | 3.16e-01 | 78.3% | 67.5% |
| 3171242 | 221.1.1.199 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF29076 | 0.51 | 41.0 | 3.17e-01 | 100.0% | 42.9% |
| 4148115 | 2005.1.1.23 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans | 0.51 | 42.0 | 2.97e-01 | 98.3% | 82.7% |
| 3723257 | 5042.1.1.0 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region | 0.50 | 34.0 | 3.08e-01 | 70.0% | 56.5% |
| 3739576 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.50 | 31.0 | 3.19e-01 | 93.3% | 63.6% |