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IMGVR_UViG_3300005239_003906-3300005239-Ga0073579_11685774
Arc-VirIMGVR_UViG_3300005239_003906-3300005239-Ga0073579_11685774
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-86
Domain cluster:
rep: BML_08182015_6_5m_scaffold_18_prodigal-single.1__X__X__00293__D9-115
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01227.28 best | GTP_cyclohydroI | 92.4 | 3.30e-26 | 96.5% | 45.8% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uqfA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.92 | 86.0 | 7.21e-01 | 98.8% | 62.7% |
| 1a8rA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.90 | 84.0 | 7.04e-01 | 100.0% | 62.5% |
| 1nbuA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.77 | 55.0 | 4.91e-01 | 77.9% | 54.2% |
| 1pwkA00 | 3.30.740.10 | Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 0.65 | 43.0 | 4.22e-01 | 95.3% | 63.7% |
| 1ex2A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.62 | 53.0 | 4.09e-01 | 91.9% | 83.8% |
| 3k59A07 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.61 | 46.0 | 3.90e-01 | 81.4% | 97.9% |
| 1d1dA02 | 1.10.1200.30 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Retrovirus capsid C-terminal domain | 0.60 | 39.0 | 4.10e-01 | 94.2% | 72.5% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.59 | 43.0 | 3.59e-01 | 77.9% | 43.8% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 47.0 | 4.03e-01 | 100.0% | 54.7% |
| 2avxA00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.57 | 44.0 | 3.55e-01 | 91.9% | 42.1% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 40.0 | 4.18e-01 | 90.7% | 84.4% |
| 3og5A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 41.0 | 4.16e-01 | 77.9% | 78.8% |
| 3i7fB02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 44.0 | 3.05e-01 | 100.0% | 23.3% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 48.0 | 3.94e-01 | 100.0% | 72.8% |
| 3nuhB03 | 3.10.20.690 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 39.0 | 3.91e-01 | 96.5% | 75.3% |
| 5dckA00 | 1.10.1200.30 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Retrovirus capsid C-terminal domain | 0.53 | 36.0 | 3.89e-01 | 93.0% | 85.9% |
| 6wxrA01 | 1.10.640.10 | Mainly Alpha › Orthogonal Bundle › Myeloperoxidase, subunit C › Haem peroxidase domain superfamily, animal type | 0.53 | 40.0 | 2.57e-01 | 81.4% | 86.4% |
| 7uclA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 47.0 | 4.45e-01 | 100.0% | 96.1% |
| 3vaxA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 36.0 | 3.50e-01 | 72.1% | 88.4% |
| 3iabB01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.51 | 36.0 | 3.49e-01 | 74.4% | 87.9% |
| 4cyfA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.51 | 44.0 | 3.14e-01 | 100.0% | 51.9% |
| 1afwB01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 44.0 | 3.33e-01 | 98.8% | 44.1% |
| 2afsA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.50 | 43.0 | 2.99e-01 | 100.0% | 78.0% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3207298 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.92 | 87.0 | 6.25e-01 | 98.8% | 39.5% |
| None | — | 0.92 | 84.0 | 6.32e-01 | 95.3% | 45.6% | |
| 4423132 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.92 | 84.0 | 6.24e-01 | 96.5% | 42.6% |
| 4519113 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.92 | 82.0 | 6.24e-01 | 94.2% | 45.0% |
| 4173308 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.91 | 82.0 | 6.19e-01 | 94.2% | 45.0% |
| 5749 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.90 | 84.0 | 6.02e-01 | 100.0% | 38.5% |
| 3365873 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.90 | 84.0 | 5.20e-01 | 98.8% | 21.0% |
| 4108348 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.89 | 79.0 | 5.89e-01 | 94.2% | 41.5% |
| 3663526 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.89 | 82.0 | 5.99e-01 | 97.7% | 42.9% |
| 4441969 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.86 | 78.0 | 5.92e-01 | 96.5% | 44.9% |
| 4024225 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.83 | 73.0 | 5.43e-01 | 91.9% | 43.7% |
| 4990176 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.81 | 67.0 | 5.29e-01 | 100.0% | 44.7% |
| 3897425 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.78 | 43.0 | 4.40e-01 | 95.3% | 56.5% |
| 3235434 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.72 | 44.0 | 4.40e-01 | 95.3% | 60.0% |
| 3471144 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.69 | 44.0 | 4.49e-01 | 95.3% | 65.9% |
| 2779096 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.69 | 44.0 | 4.36e-01 | 95.3% | 62.2% |
| 148947 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.69 | 43.0 | 4.39e-01 | 95.3% | 64.0% |
| 4890953 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.68 | 43.0 | 4.29e-01 | 96.5% | 61.5% |
| 3517087 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.68 | 43.0 | 4.05e-01 | 95.3% | 53.3% |
| 3241427 | 864.1.1.5 ↗ | a+b two layers › DLC › DLC › DLC › DUF684 | 0.68 | 42.0 | 4.43e-01 | 98.8% | 70.7% |
| 3470157 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.68 | 44.0 | 4.48e-01 | 95.3% | 67.9% |
| 3482059 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.67 | 44.0 | 4.26e-01 | 95.3% | 61.3% |
| 3226757 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.67 | 42.0 | 4.31e-01 | 95.3% | 64.7% |
| 3503257 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.67 | 43.0 | 4.17e-01 | 95.3% | 58.2% |
| 3597342 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.67 | 43.0 | 4.42e-01 | 95.3% | 67.1% |
| 3488996 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.67 | 43.0 | 4.41e-01 | 95.3% | 67.1% |
| 3487926 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.67 | 43.0 | 4.39e-01 | 95.3% | 67.1% |
| 3596959 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.67 | 43.0 | 4.38e-01 | 95.3% | 67.1% |
| 3471972 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.66 | 43.0 | 4.41e-01 | 98.8% | 68.2% |
| 3224270 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.64 | 39.0 | 3.66e-01 | 95.3% | 50.5% |
| 4525456 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.61 | 46.0 | 4.15e-01 | 79.1% | 86.1% |
| 3358599 | 7581.1.1.13 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ACP_syn_III | 0.59 | 43.0 | 3.90e-01 | 80.2% | 55.0% |
| 3929562 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.58 | 44.0 | 4.47e-01 | 77.9% | 83.3% |
| 3485946 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.58 | 44.0 | 4.08e-01 | 79.1% | 72.4% |
| 3497368 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.57 | 43.0 | 4.40e-01 | 79.1% | 84.7% |
| 1855692 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.57 | 44.0 | 4.25e-01 | 81.4% | 79.4% |
| 3694783 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.55 | 36.0 | 2.88e-01 | 73.3% | 33.5% |
| 3716479 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.54 | 45.0 | 3.67e-01 | 100.0% | 46.9% |
| 3510231 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.54 | 43.0 | 2.96e-01 | 89.5% | 55.8% |
| 3576850 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.52 | 36.0 | 2.49e-01 | 73.3% | 77.8% |
| 5056319 | 177.1.1.0 ↗ | alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease | 0.52 | 39.0 | 3.15e-01 | 81.4% | 87.0% |
| 3980756 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.52 | 36.0 | 3.41e-01 | 72.1% | 70.5% |
| 3887044 | 4292.2.1.2 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › KIF1B | 0.51 | 37.0 | 3.23e-01 | 80.2% | 50.8% |
| 3955767 | 323.1.1.37 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding, Condensation | 0.50 | 44.0 | 2.47e-01 | 100.0% | 12.9% |
| 3487442 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.50 | 35.0 | 3.20e-01 | 74.4% | 73.6% |
| 3249225 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.50 | 37.0 | 3.03e-01 | 76.7% | 78.1% |
| 3172766 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.50 | 42.0 | 3.15e-01 | 96.5% | 81.7% |
| 3467049 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.50 | 43.0 | 3.40e-01 | 100.0% | 53.0% |