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IMGVR_UViG_3300005253_000250-3300005253-Ga0073583_112067918
Arc-VirIMGVR_UViG_3300005253_000250-3300005253-Ga0073583_112067918
Identity
- Kingdom:
- archaea
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-65
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qs4A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.77 | 42.0 | 2.87e-01 | 100.0% | 16.2% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 51.0 | 2.97e-01 | 100.0% | 9.6% |
| 3rgaA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 50.0 | 3.83e-01 | 100.0% | 34.6% |
| 3ly7A01 | 3.40.50.11830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 45.0 | 3.21e-01 | 100.0% | 24.8% |
| 7pikC01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 45.0 | 2.99e-01 | 100.0% | 21.7% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.58 | 35.0 | 2.92e-01 | 96.4% | 31.7% |
| 1burS00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.56 | 51.0 | 3.89e-01 | 100.0% | 65.9% |
| 8ainB01 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.55 | 42.0 | 3.60e-01 | 100.0% | 47.6% |
| 5yprA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 43.0 | 3.84e-01 | 98.2% | 59.0% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.54 | 49.0 | 3.87e-01 | 100.0% | 63.9% |
| 3icaB00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 46.0 | 3.18e-01 | 100.0% | 58.7% |
| 1kb0A01 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.53 | 43.0 | 2.57e-01 | 100.0% | 62.8% |
| 2k4nA00 | 3.30.720.70 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 45.0 | 3.65e-01 | 100.0% | 48.6% |
| 4mt5A02 | 2.60.40.4300 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 47.0 | 3.70e-01 | 100.0% | 53.6% |
| 2r2cB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 46.0 | 3.64e-01 | 100.0% | 66.1% |
| 3p2hA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 45.0 | 3.15e-01 | 100.0% | 38.6% |
| 1ng2A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 37.0 | 4.05e-01 | 98.2% | 100.0% |
| 1hkfA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 46.0 | 3.65e-01 | 100.0% | 72.2% |
| 4wsiA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 42.0 | 4.01e-01 | 100.0% | 78.8% |
| 3qldA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 38.0 | 2.89e-01 | 100.0% | 31.6% |
| 2xh6B01 | 2.170.15.20 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › | 0.50 | 39.0 | 2.94e-01 | 94.5% | 60.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929282 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.83 | 52.0 | 4.63e-01 | 100.0% | 46.7% |
| 3233389 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.80 | 41.0 | 2.43e-01 | 100.0% | 7.1% |
| 3962549 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.77 | 53.0 | 3.76e-01 | 100.0% | 26.0% |
| 3442742 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.70 | 43.0 | 4.88e-01 | 100.0% | 85.0% |
| 3452042 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.68 | 47.0 | 4.74e-01 | 98.2% | 72.7% |
| 3938391 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.61 | 54.0 | 3.32e-01 | 100.0% | 17.6% |
| 3562982 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.59 | 50.0 | 4.03e-01 | 100.0% | 51.3% |
| 3198568 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.58 | 48.0 | 3.72e-01 | 100.0% | 39.3% |
| 3998929 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 49.0 | 3.72e-01 | 100.0% | 40.8% |
| 4659490 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.56 | 51.0 | 3.94e-01 | 100.0% | 60.0% |
| 3687632 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 3.39e-01 | 100.0% | 70.3% |
| 4008205 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.55 | 51.0 | 3.81e-01 | 100.0% | 47.2% |
| 4008870 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.55 | 50.0 | 2.96e-01 | 100.0% | 14.9% |
| 3780695 | 7031.1.1.1 ↗ | a+b complex topology › extracellular domain of BK channel beta4 subunit › extracellular domain of BK channel beta4 subunit › extracellular domain of BK channel beta4 subunit › CaKB | 0.55 | 43.0 | 3.48e-01 | 94.5% | 88.8% |
| 4018119 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 43.0 | 2.61e-01 | 100.0% | 12.7% |
| 3810779 | 243.3.1.45 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › TIN1 | 0.53 | 45.0 | 3.71e-01 | 96.4% | 51.4% |
| 3491618 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 4.02e-01 | 98.2% | 87.3% |
| 3743243 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.53 | 41.0 | 3.55e-01 | 100.0% | 54.1% |
| 4015212 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 46.0 | 3.44e-01 | 100.0% | 40.7% |
| 184717 | 4272.2.1.1 ↗ | a+b two layers › Nqo5-like › Protein PF0246 › Protein PF0246 › DUF5748 | 0.53 | 45.0 | 3.65e-01 | 100.0% | 48.6% |
| 3356242 | 243.3.1.45 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › TIN1 | 0.52 | 45.0 | 3.76e-01 | 100.0% | 56.0% |
| 5057039 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 38.0 | 3.34e-01 | 98.2% | 53.8% |
| 3425035 | 243.1.1.122 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF28340 | 0.52 | 45.0 | 3.74e-01 | 100.0% | 57.6% |
| 3643291 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 46.0 | 3.67e-01 | 100.0% | 50.0% |
| 3894023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 43.0 | 3.72e-01 | 100.0% | 61.2% |
| 3999845 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.50 | 41.0 | 3.57e-01 | 98.2% | 56.7% |
| 3613292 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 45.0 | 2.71e-01 | 100.0% | 19.7% |