Back to structures

IMGVR_UViG_3300005268_000067-3300005268-Ga0065698_1021748

Arc-Vir

IMGVR_UViG_3300005268_000067-3300005268-Ga0065698_1021748

Quality

90.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-109
PDB
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 52.0 6.60e-01 70.1% 98.5%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 51.0 5.49e-01 71.0% 67.4%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 52.0 6.26e-01 70.1% 89.0%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 50.0 5.91e-01 71.0% 82.9%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 49.0 4.59e-01 71.0% 49.2%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 52.0 6.18e-01 71.0% 91.8%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 50.0 6.08e-01 70.1% 91.5%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 53.0 5.93e-01 72.0% 83.5%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 49.0 4.43e-01 71.0% 47.8%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 50.0 4.57e-01 71.0% 50.7%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 53.0 5.95e-01 71.0% 86.9%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 5.69e-01 71.0% 76.5%
3b73B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 48.0 5.30e-01 71.0% 74.2%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 50.0 4.52e-01 73.8% 48.9%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 49.0 5.81e-01 70.1% 91.8%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 5.55e-01 71.0% 78.6%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 48.0 4.39e-01 71.0% 49.3%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 49.0 4.45e-01 71.0% 49.3%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 49.0 5.15e-01 71.0% 70.4%
4cgyA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.76 57.0 4.61e-01 77.6% 60.0%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 48.0 4.18e-01 71.0% 44.9%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 47.0 4.28e-01 71.0% 49.6%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 47.0 5.01e-01 72.0% 73.1%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 48.0 4.30e-01 71.0% 51.1%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 4.55e-01 73.8% 68.0%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 46.0 5.31e-01 72.9% 90.7%
2v7fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 4.83e-01 76.6% 63.3%
4d7kA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 45.0 4.73e-01 72.0% 69.8%
7bqjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 45.0 5.05e-01 72.0% 84.0%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 43.0 4.87e-01 72.0% 79.3%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 43.0 5.34e-01 72.0% 100.0%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 45.0 5.25e-01 72.0% 90.8%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 5.46e-01 73.8% 90.5%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.55e-01 73.8% 57.9%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.52e-01 73.8% 57.9%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 4.47e-01 72.9% 59.7%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 43.0 5.26e-01 72.0% 100.0%
2hs5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 43.0 5.25e-01 77.6% 100.0%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 44.0 5.25e-01 71.0% 100.0%
3by6C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 44.0 5.08e-01 70.1% 90.9%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 45.0 5.26e-01 72.9% 97.3%
4q48A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.00e-01 72.0% 51.7%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 5.16e-01 72.9% 91.9%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 42.0 4.57e-01 72.0% 74.7%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 43.0 5.04e-01 71.0% 97.3%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.90e-01 73.8% 87.1%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.64 44.0 4.69e-01 75.7% 80.9%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 4.01e-01 77.6% 75.5%
1z21A00 1.10.10.1000 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain 0.59 40.0 4.24e-01 71.0% 85.4%
2jiiA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 38.0 3.12e-01 75.7% 88.5%
2yayA02 1.20.1670.10 Mainly Alpha › Up-down Bundle › all-alpha NTP pyrophosphatase › Type II deoxyuridine triphosphatase 0.51 35.0 3.30e-01 71.0% 78.5%
5jc3A02 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.51 37.0 3.52e-01 85.0% 65.1%
2q83A02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.50 39.0 3.07e-01 84.1% 54.1%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5030366 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.94 62.0 7.25e-01 72.0% 90.0%
5025361 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.92 59.0 6.92e-01 70.1% 89.7%
3604595 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.92 60.0 7.08e-01 70.1% 91.1%
5042147 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.91 59.0 6.90e-01 70.1% 88.7%
5054311 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.91 60.0 6.61e-01 71.0% 80.9%
5013996 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.90 59.0 7.03e-01 70.1% 94.7%
4948021 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.90 59.0 6.79e-01 70.1% 88.7%
5068810 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.90 54.0 6.92e-01 71.0% 100.0%
5012902 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.89 60.0 7.34e-01 71.0% 100.0%
5057473 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.89 60.0 7.14e-01 71.0% 97.3%
5020732 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.89 56.0 6.89e-01 72.0% 97.1%
4950413 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.89 58.0 6.75e-01 70.1% 89.9%
5060041 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 60.0 7.00e-01 70.1% 93.8%
5048178 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 58.0 6.65e-01 71.0% 90.0%
5007881 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.86 62.0 6.81e-01 73.8% 95.6%
4942687 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 61.0 7.00e-01 77.6% 96.2%
5044592 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.85 50.0 6.13e-01 72.9% 90.0%
5064032 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 54.0 6.66e-01 70.1% 100.0%
5023102 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.84 51.0 5.13e-01 71.0% 60.0%
4975263 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.84 56.0 6.24e-01 72.9% 84.7%
4957083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 53.0 5.82e-01 71.0% 76.7%
4935618 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 51.0 5.46e-01 72.0% 69.5%
5081391 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 58.0 6.48e-01 71.0% 91.8%
5046651 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 54.0 6.55e-01 71.0% 95.9%
4167856 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.83 53.0 5.91e-01 72.0% 81.2%
5010061 101.1.2.87 alpha arrays › HTH › HTH › winged helix domain › PaaX 0.83 53.0 6.06e-01 70.1% 86.3%
4976799 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 51.0 5.45e-01 71.0% 70.5%
5073255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 54.0 5.57e-01 70.1% 71.0%
5005057 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.82 49.0 4.81e-01 71.0% 56.5%
3700467 101.1.2.97 alpha arrays › HTH › HTH › winged helix domain › RPA_C 0.81 54.0 6.12e-01 72.0% 86.9%
5078008 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 55.0 6.49e-01 74.8% 98.7%
5077744 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.81 51.0 5.02e-01 72.0% 60.0%
4929718 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 48.0 4.86e-01 72.0% 61.0%
5065138 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.80 50.0 5.21e-01 75.7% 68.0%
5065189 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.80 53.0 5.48e-01 77.6% 72.0%
3741636 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 57.0 6.12e-01 73.8% 84.9%
3999457 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 53.0 6.26e-01 71.0% 98.7%
4667119 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 49.0 4.50e-01 72.0% 49.6%
4962131 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.79 46.0 4.85e-01 71.0% 65.3%
3597985 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 54.0 6.24e-01 72.0% 95.0%
5078889 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 49.0 4.65e-01 73.8% 54.4%
5075188 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 51.0 6.04e-01 72.9% 97.3%
3284140 101.1.2.87 alpha arrays › HTH › HTH › winged helix domain › PaaX 0.77 53.0 5.65e-01 72.9% 80.0%
4030696 101.1.2.499 alpha arrays › HTH › HTH › winged helix domain › HTH_MCM7 0.76 55.0 6.17e-01 79.4% 95.3%
3283252 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.75 47.0 4.73e-01 72.0% 61.8%
3971896 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 52.0 5.87e-01 72.0% 93.8%
4945461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 51.0 5.40e-01 73.8% 77.9%
4964961 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 50.0 5.28e-01 74.8% 76.8%
3965527 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 48.0 5.29e-01 72.9% 82.4%
4022146 101.1.2.520 alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.74 50.0 5.18e-01 72.0% 74.0%
3252021 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 52.0 5.87e-01 72.0% 100.0%
4956415 101.1.2.18 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e 0.73 55.0 4.70e-01 77.6% 60.6%
4525548 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 49.0 5.12e-01 72.9% 74.0%
3622328 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.72 49.0 5.71e-01 72.9% 100.0%
3866769 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.64e-01 81.3% 87.4%
4928633 101.1.2.18 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e 0.71 50.0 5.06e-01 72.0% 76.2%
3945425 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.70 47.0 5.23e-01 73.8% 85.9%
3949310 101.1.2.87 alpha arrays › HTH › HTH › winged helix domain › PaaX 0.69 54.0 5.19e-01 81.3% 78.3%
3652603 101.1.2.516 alpha arrays › HTH › HTH › winged helix domain › PF25895 0.69 53.0 5.32e-01 80.4% 89.1%
1233793 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 5.26e-01 73.8% 85.7%
3583168 101.1.2.490 alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 0.68 53.0 5.34e-01 83.2% 89.1%
1175649 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.67 46.0 5.09e-01 71.0% 92.6%
1511065 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.66 44.0 4.47e-01 73.8% 68.5%
3278087 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.62 49.0 4.94e-01 87.9% 84.5%
3285685 4107.1.1.1 alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › ABATE,zf-CGNR 0.56 38.0 3.21e-01 71.0% 97.9%