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IMGVR_UViG_3300005275_000006-3300005275-Ga0065719_10659048
Arc-VirIMGVR_UViG_3300005275_000006-3300005275-Ga0065719_10659048
Identity
- Kingdom:
- archaea
Quality
70.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-86
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.69 | 52.0 | 5.47e-01 | 84.6% | 95.7% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.66 | 48.0 | 4.79e-01 | 80.8% | 78.6% |
| 1qxfA00 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.65 | 52.0 | 5.08e-01 | 90.4% | 82.8% |
| 4zdtC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 51.0 | 4.74e-01 | 90.4% | 78.6% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.62 | 44.0 | 4.19e-01 | 75.0% | 64.5% |
| 7r0kA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.60 | 43.0 | 3.02e-01 | 86.5% | 24.1% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.59 | 42.0 | 4.03e-01 | 76.9% | 67.7% |
| 2bbwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 40.0 | 2.66e-01 | 86.5% | 18.6% |
| 1m2gA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.55 | 46.0 | 3.88e-01 | 96.2% | 53.8% |
| 4fk1A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 47.0 | 3.20e-01 | 96.2% | 32.6% |
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.55 | 37.0 | 3.64e-01 | 71.2% | 87.7% |
| 1c4zA01 | 3.90.1750.10 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains | 0.55 | 45.0 | 3.20e-01 | 92.3% | 38.7% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 40.0 | 3.80e-01 | 92.3% | 66.2% |
| 6hoyA02 | 2.20.28.200 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.53 | 40.0 | 4.10e-01 | 86.5% | 89.8% |
| 4bmjA00 | 6.20.250.40 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.53 | 32.0 | 3.05e-01 | 92.3% | 48.4% |
| 2iqcA00 | 1.25.40.490 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 40.0 | 2.86e-01 | 84.6% | 38.7% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.52 | 41.0 | 2.84e-01 | 86.5% | 29.1% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 41.0 | 2.67e-01 | 100.0% | 17.8% |
| 3mekA02 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 33.0 | 3.39e-01 | 92.3% | 69.4% |
| 2ph1A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 38.0 | 2.62e-01 | 90.4% | 71.3% |
| 7sf8A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 44.0 | 2.88e-01 | 100.0% | 45.6% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.51 | 39.0 | 3.26e-01 | 92.3% | 84.3% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3238220 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.80 | 55.0 | 5.16e-01 | 73.1% | 58.5% |
| 3846046 | 221.1.1.195 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › VCIP135_N | 0.77 | 57.0 | 5.35e-01 | 84.6% | 64.6% |
| 5069323 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 55.0 | 5.67e-01 | 80.8% | 90.0% |
| 3638416 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.74 | 56.0 | 5.54e-01 | 94.2% | 78.2% |
| 4968628 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 53.0 | 5.90e-01 | 76.9% | 100.0% |
| 3922513 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 48.0 | 5.39e-01 | 71.2% | 100.0% |
| 5059205 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 49.0 | 5.42e-01 | 71.2% | 92.5% |
| 5071089 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 53.0 | 5.44e-01 | 78.8% | 90.0% |
| 4522782 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 47.0 | 5.29e-01 | 76.9% | 100.0% |
| 4991056 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.72 | 53.0 | 5.22e-01 | 78.8% | 80.0% |
| 3457574 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.71 | 49.0 | 4.59e-01 | 73.1% | 64.6% |
| 4979039 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.70 | 57.0 | 3.80e-01 | 96.2% | 23.0% |
| 3233807 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 57.0 | 5.29e-01 | 94.2% | 80.0% |
| 3785476 | 375.1.1.57 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Vps36-NZF-N | 0.69 | 53.0 | 5.57e-01 | 82.7% | 97.8% |
| 5034626 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 47.0 | 5.10e-01 | 71.2% | 92.5% |
| 3809044 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 47.0 | 4.97e-01 | 84.6% | 82.2% |
| 3541580 | 375.1.1.78 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-3CxxC_2 | 0.68 | 46.0 | 4.13e-01 | 78.8% | 50.0% |
| 5075524 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.67 | 58.0 | 3.98e-01 | 100.0% | 49.2% |
| 3194224 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.67 | 48.0 | 4.30e-01 | 84.6% | 55.7% |
| 3733476 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.65 | 53.0 | 3.84e-01 | 88.5% | 77.1% |
| 2322754 | 376.1.2.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_4 | 0.65 | 45.0 | 4.05e-01 | 73.1% | 83.8% |
| 3226770 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.65 | 44.0 | 4.72e-01 | 73.1% | 97.5% |
| 3780096 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.65 | 32.0 | 2.96e-01 | 100.0% | 32.3% |
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 49.0 | 3.78e-01 | 92.3% | 36.7% |
| 3226989 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.62 | 50.0 | 4.96e-01 | 90.4% | 94.5% |
| 3928472 | 376.1.1.95 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RH_dom | 0.61 | 44.0 | 4.08e-01 | 78.8% | 61.5% |
| 4021767 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.60 | 41.0 | 4.49e-01 | 84.6% | 95.0% |
| 3612590 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 43.0 | 4.37e-01 | 78.8% | 100.0% |
| 3471613 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.59 | 33.0 | 3.75e-01 | 100.0% | 72.5% |
| 4927454 | 386.1.1.418 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-FPG_IleRS | 0.59 | 42.0 | 4.47e-01 | 78.8% | 100.0% |
| 3230733 | 376.1.2.24 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › RH_dom | 0.58 | 38.0 | 3.60e-01 | 71.2% | 58.3% |
| 3658440 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.57 | 35.0 | 3.47e-01 | 98.1% | 56.4% |
| 3825851 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 45.0 | 3.99e-01 | 82.7% | 72.9% |
| 2876662 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.57 | 41.0 | 3.19e-01 | 82.7% | 33.6% |
| 3744599 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.57 | 40.0 | 4.34e-01 | 84.6% | 100.0% |
| 3482297 | 386.1.1.112 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2HC_2 | 0.57 | 33.0 | 2.64e-01 | 98.1% | 26.4% |
| 3657165 | 376.1.3.53 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_VAL1_N | 0.57 | 40.0 | 3.76e-01 | 78.8% | 61.9% |
| 3498926 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 30.0 | 3.53e-01 | 96.2% | 77.1% |
| 3722097 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.56 | 30.0 | 2.60e-01 | 88.5% | 32.5% |
| 3528394 | 220.1.1.185 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RH_dom | 0.55 | 36.0 | 3.75e-01 | 76.9% | 72.0% |
| 3843296 | 386.1.1.112 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2HC_2 | 0.54 | 33.0 | 3.24e-01 | 96.2% | 56.4% |
| 3888986 | 376.1.1.95 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RH_dom | 0.52 | 36.0 | 3.68e-01 | 76.9% | 74.0% |
| 3658775 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.52 | 29.0 | 3.09e-01 | 86.5% | 58.1% |
| 3565792 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 42.0 | 2.75e-01 | 100.0% | 82.1% |