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IMGVR_UViG_3300005298_000131-3300005298-Ga0071330_106219612

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300005298_000131-3300005298-Ga0071330_106219612 ↗
Kingdom:: archaea

Quality

75.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 130-281

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3e0jB00	3.90.1030.20	Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain	0.57	29.0	3.02e-01	84.9%	49.0%
1ng4A02	3.30.9.10	Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2	0.56	33.0	3.49e-01	77.0%	62.1%
4yshA02	3.30.9.10	Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2	0.56	33.0	3.43e-01	78.9%	59.6%
3r8yA01	3.30.70.250	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding	0.55	27.0	3.65e-01	74.3%	100.0%
1j27A00	3.30.70.1120	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TT1725-like	0.55	35.0	4.16e-01	76.3%	99.0%
1s3rA04	2.60.40.1430	Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4	0.53	27.0	3.08e-01	80.3%	64.0%
7chkB01	2.60.120.20	Mainly Beta › Sandwich › Jelly Rolls ›	0.53	33.0	3.55e-01	81.6%	72.0%
3ka7A02	3.90.660.50	Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 ›	0.52	35.0	3.17e-01	76.3%	49.0%
3w6wB02	2.60.310.20	Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 ›	0.51	35.0	3.76e-01	77.6%	79.4%
2pgcA02	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.50	32.0	3.70e-01	73.0%	89.6%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3583178	304.24.1.0 ↗	a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like	0.53	30.0	3.05e-01	80.9%	52.9%
4016320	304.4.1.0 ↗	a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel	0.53	35.0	4.11e-01	78.3%	97.1%
3496975	230.5.1.0 ↗	a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain	0.53	32.0	3.44e-01	74.3%	69.2%
4977988	230.5.1.1 ↗	a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7	0.52	32.0	3.38e-01	74.3%	66.7%
5053865	821.1.1.0 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease	0.52	28.0	3.41e-01	89.5%	82.2%
3500570	230.5.1.1 ↗	a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7	0.52	32.0	3.25e-01	74.3%	60.0%
3732337	230.5.1.1 ↗	a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7	0.52	31.0	3.39e-01	74.3%	69.2%
4995673	230.5.1.1 ↗	a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7	0.52	32.0	3.53e-01	77.6%	76.7%
4932838	230.5.1.1 ↗	a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7	0.52	31.0	3.49e-01	74.3%	75.0%
4490995	230.5.1.1 ↗	a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7	0.51	34.0	2.80e-01	74.3%	37.7%
4947546	304.100.1.0 ↗	a+b two layers › Alpha-beta plaits › PurS-like › PurS-like	0.51	29.0	3.71e-01	75.0%	100.0%
3998793	230.5.1.1 ↗	a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7	0.51	33.0	3.30e-01	74.3%	62.5%
4285727	304.24.1.1 ↗	a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C	0.50	29.0	3.30e-01	81.6%	73.0%

D2 medium residues 8-127

PDB