←Back to structures
IMGVR_UViG_3300005300_000028-3300005300-Ga0072500_1715915
Arc-VirIMGVR_UViG_3300005300_000028-3300005300-Ga0072500_1715915
Identity
- Kingdom:
- archaea
Quality
91.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-146
Domain cluster:
rep: CAKLQF020000002.1__CAH1073194.1__SAMEA5780031_00410__00047__D1-170
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01040.24 best | UbiA | 62.5 | 5.40e-17 | 93.0% | 50.4% |
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.82 | 76.0 | 7.39e-01 | 98.6% | 91.0% |
| 5jfqB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.76 | 71.0 | 5.43e-01 | 100.0% | 50.0% |
| 3tc1B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.76 | 71.0 | 5.44e-01 | 100.0% | 48.9% |
| 3q2qA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.76 | 70.0 | 5.30e-01 | 100.0% | 44.3% |
| 6kd7A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.76 | 71.0 | 5.30e-01 | 100.0% | 45.9% |
| 1yhlA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.75 | 70.0 | 5.12e-01 | 100.0% | 50.3% |
| 2z4vA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.75 | 70.0 | 5.33e-01 | 100.0% | 50.0% |
| 4dhdA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.75 | 70.0 | 5.22e-01 | 100.0% | 49.1% |
| 1v4eA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.74 | 69.0 | 5.45e-01 | 100.0% | 52.5% |
| 4kk2B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.74 | 68.0 | 5.10e-01 | 100.0% | 49.1% |
| 5hn9C00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.74 | 68.0 | 5.12e-01 | 100.0% | 52.4% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.68 | 45.0 | 4.71e-01 | 79.6% | 73.1% |
| 3ezhA00 | 1.20.120.960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase NarX, sensor domain | 0.66 | 45.0 | 4.98e-01 | 80.3% | 86.8% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 51.0 | 4.57e-01 | 79.6% | 62.0% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.64 | 46.0 | 5.12e-01 | 81.0% | 93.8% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.64 | 52.0 | 3.93e-01 | 85.9% | 97.6% |
| 2z73B01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.63 | 56.0 | 4.18e-01 | 96.5% | 80.6% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 57.0 | 4.99e-01 | 99.3% | 81.0% |
| 3k66A01 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.62 | 49.0 | 4.30e-01 | 83.1% | 57.4% |
| 1st6A02 | 1.20.120.810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle | 0.62 | 44.0 | 3.73e-01 | 81.7% | 44.1% |
| 4ib4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.62 | 54.0 | 4.31e-01 | 95.8% | 88.1% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 36.0 | 4.21e-01 | 97.2% | 80.6% |
| 3zevB00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 54.0 | 4.21e-01 | 95.8% | 88.8% |
| 5tgzA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 54.0 | 4.29e-01 | 97.2% | 85.6% |
| 7ys6A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 53.0 | 4.36e-01 | 96.5% | 94.0% |
| 8gr7A01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 55.0 | 4.21e-01 | 100.0% | 45.8% |
| 7eq1R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 53.0 | 4.19e-01 | 95.1% | 85.0% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 47.0 | 4.89e-01 | 97.2% | 91.7% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 41.0 | 3.88e-01 | 71.8% | 89.1% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.58 | 38.0 | 4.27e-01 | 96.5% | 89.5% |
| 3mpxA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.58 | 43.0 | 3.79e-01 | 77.5% | 61.2% |
| 1m56C02 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.57 | 45.0 | 4.10e-01 | 84.5% | 75.0% |
| 7xk2R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 50.0 | 4.08e-01 | 94.4% | 96.6% |
| 7q37A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 50.0 | 4.38e-01 | 96.5% | 64.5% |
| 3lewA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 49.0 | 3.69e-01 | 92.3% | 56.8% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 42.0 | 4.12e-01 | 78.9% | 98.7% |
| 7wujE01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 48.0 | 3.99e-01 | 95.8% | 87.0% |
| 8hixR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 47.0 | 3.87e-01 | 95.1% | 90.7% |
| 3cqcA00 | 1.20.190.50 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.55 | 44.0 | 3.65e-01 | 83.1% | 74.9% |
| 7cfmR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 47.0 | 3.94e-01 | 95.8% | 98.1% |
| 6c1qB02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 48.0 | 3.90e-01 | 97.2% | 95.3% |
| 6me6B02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 47.0 | 3.88e-01 | 96.5% | 90.7% |
| 1fntc01 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.54 | 41.0 | 3.81e-01 | 81.0% | 90.4% |
| 7sf7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 46.0 | 3.78e-01 | 95.1% | 85.2% |
| 6cnzF00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.53 | 40.0 | 3.89e-01 | 78.9% | 100.0% |
| 1otkA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 44.0 | 3.70e-01 | 92.3% | 89.3% |
| 4bemJ00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.52 | 41.0 | 3.76e-01 | 83.1% | 75.1% |
| 6o7uc01 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.52 | 40.0 | 3.64e-01 | 81.7% | 79.5% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 42.0 | 4.26e-01 | 97.9% | 86.9% |
| 6k41R00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 42.0 | 3.60e-01 | 90.1% | 86.8% |
| 3teqB00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 32.0 | 3.79e-01 | 83.8% | 91.1% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043455 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.90 | 84.0 | 6.50e-01 | 100.0% | 49.3% |
| 4990225 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.90 | 84.0 | 6.53e-01 | 100.0% | 50.0% |
| 5033911 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 85.0 | 6.41e-01 | 100.0% | 50.2% |
| 4427147 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 85.0 | 6.60e-01 | 100.0% | 51.6% |
| 4945598 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 84.0 | 6.48e-01 | 100.0% | 53.8% |
| 3289222 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.89 | 84.0 | 6.38e-01 | 100.0% | 50.5% |
| 4969150 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.43e-01 | 100.0% | 49.8% |
| 4941826 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.55e-01 | 100.0% | 52.7% |
| 5001888 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.37e-01 | 100.0% | 48.7% |
| 5037826 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.54e-01 | 100.0% | 51.6% |
| 5002501 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.46e-01 | 100.0% | 49.8% |
| 4608311 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.38e-01 | 100.0% | 49.8% |
| 5081280 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.88 | 84.0 | 6.29e-01 | 100.0% | 49.4% |
| 4073768 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 82.0 | 6.36e-01 | 100.0% | 49.6% |
| 3285606 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 77.0 | 6.05e-01 | 90.8% | 49.8% |
| 4237149 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 84.0 | 6.49e-01 | 100.0% | 50.7% |
| 4956655 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 82.0 | 6.41e-01 | 100.0% | 50.9% |
| 4386232 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 83.0 | 6.54e-01 | 100.0% | 52.6% |
| 4382409 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 81.0 | 6.32e-01 | 100.0% | 49.6% |
| 5064176 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 82.0 | 6.61e-01 | 100.0% | 55.3% |
| 4682389 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.88 | 83.0 | 6.20e-01 | 100.0% | 48.4% |
| 5034155 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.19e-01 | 100.0% | 46.9% |
| 5042650 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.48e-01 | 100.0% | 52.4% |
| 5060740 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.27e-01 | 100.0% | 53.8% |
| 5036142 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 69.0 | 5.57e-01 | 83.1% | 47.1% |
| 5013957 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.63e-01 | 100.0% | 58.0% |
| 5033594 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.14e-01 | 100.0% | 43.7% |
| 4974029 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.46e-01 | 100.0% | 52.4% |
| 5056279 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 83.0 | 6.41e-01 | 100.0% | 52.1% |
| 4945548 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 68.0 | 5.99e-01 | 80.3% | 61.0% |
| 4224814 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 82.0 | 6.44e-01 | 100.0% | 51.6% |
| 5051109 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 82.0 | 6.30e-01 | 100.0% | 52.1% |
| 3424723 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.87 | 82.0 | 6.18e-01 | 100.0% | 50.5% |
| 4929750 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 82.0 | 6.24e-01 | 100.0% | 52.7% |
| 4223793 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 82.0 | 6.33e-01 | 100.0% | 55.3% |
| 4934546 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 76.0 | 6.07e-01 | 92.3% | 50.8% |
| 5027868 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 82.0 | 6.43e-01 | 100.0% | 52.6% |
| 4157814 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 82.0 | 6.24e-01 | 100.0% | 51.9% |
| 4961555 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 82.0 | 6.20e-01 | 100.0% | 48.7% |
| 3376189 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.86 | 81.0 | 6.13e-01 | 100.0% | 50.5% |
| 4960914 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.18e-01 | 100.0% | 49.3% |
| 5074805 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 5.99e-01 | 100.0% | 49.4% |
| 5033106 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.20e-01 | 100.0% | 52.6% |
| 4947255 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.12e-01 | 100.0% | 51.2% |
| 4085617 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.30e-01 | 100.0% | 52.0% |
| 5062663 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 73.0 | 5.83e-01 | 89.4% | 50.0% |
| 4177810 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 81.0 | 6.20e-01 | 100.0% | 49.7% |
| 5029784 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.10e-01 | 100.0% | 47.5% |
| 5033987 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.10e-01 | 100.0% | 51.0% |
| 3664662 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 5.98e-01 | 100.0% | 50.3% |
| 4311867 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.20e-01 | 100.0% | 53.3% |
| 5067253 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.85 | 80.0 | 6.26e-01 | 100.0% | 52.7% |
| 5072228 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.84 | 79.0 | 5.97e-01 | 100.0% | 52.9% |
| 4943913 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.84 | 78.0 | 6.05e-01 | 100.0% | 51.2% |
| 4976446 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.83 | 78.0 | 6.10e-01 | 100.0% | 51.1% |
| 4942290 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.83 | 78.0 | 6.43e-01 | 100.0% | 62.5% |
| 5024764 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.83 | 78.0 | 6.13e-01 | 100.0% | 52.0% |
| 3299195 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.83 | 78.0 | 5.95e-01 | 100.0% | 51.0% |
| 4294564 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.82 | 77.0 | 6.04e-01 | 100.0% | 52.9% |
| 5082911 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.81 | 76.0 | 5.65e-01 | 100.0% | 45.7% |
| 4052225 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.81 | 75.0 | 5.85e-01 | 100.0% | 51.0% |
| 4614019 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.78 | 73.0 | 5.75e-01 | 100.0% | 51.6% |
| 4068837 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.78 | 73.0 | 5.63e-01 | 100.0% | 49.3% |
| 4567396 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.77 | 71.0 | 5.51e-01 | 100.0% | 51.8% |
| 159758 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.76 | 71.0 | 5.35e-01 | 100.0% | 47.4% |
| 5044170 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.75 | 70.0 | 5.19e-01 | 100.0% | 46.0% |
| 4001372 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.73 | 67.0 | 5.11e-01 | 100.0% | 54.1% |
| 5061950 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.73 | 68.0 | 5.22e-01 | 100.0% | 47.2% |
| 3702967 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.70 | 53.0 | 4.75e-01 | 84.5% | 57.4% |
| 4409486 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.64 | 59.0 | 4.77e-01 | 99.3% | 66.9% |
| 3291362 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.64 | 49.0 | 3.61e-01 | 79.6% | 84.3% |
| 3804806 | 192.29.1.34 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF677 | 0.63 | 43.0 | 4.61e-01 | 81.7% | 79.2% |
| 3651361 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.63 | 48.0 | 4.08e-01 | 80.3% | 97.8% |
| 3628221 | 603.3.1.1 ↗ | alpha bundles › STAT-like › CAPPD, an extracellular domain of amyloid beta A4 protein › CAPPD, an extracellular domain of amyloid beta A4 protein › APP_E2 | 0.62 | 50.0 | 4.15e-01 | 84.5% | 49.8% |
| 4407105 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.62 | 53.0 | 4.42e-01 | 94.4% | 85.0% |
| 4972429 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.62 | 55.0 | 4.52e-01 | 99.3% | 80.8% |
| 3589237 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.62 | 55.0 | 4.37e-01 | 99.3% | 77.0% |
| 3587163 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.61 | 55.0 | 4.53e-01 | 100.0% | 81.5% |
| 4054418 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.61 | 55.0 | 4.57e-01 | 100.0% | 88.8% |
| 4527932 | 1075.5.1.12 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ, Polysacc_synt_3 | 0.60 | 54.0 | 4.40e-01 | 100.0% | 90.4% |
| 3972153 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.59 | 53.0 | 4.76e-01 | 96.5% | 83.6% |
| 5069095 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.59 | 53.0 | 4.27e-01 | 100.0% | 83.6% |
| 3385850 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.57 | 46.0 | 3.94e-01 | 86.6% | 84.0% |
| 5058224 | 129.1.1.5 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Ferric_reduct | 0.57 | 52.0 | 4.78e-01 | 99.3% | 88.1% |
| 4947368 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.57 | 51.0 | 4.87e-01 | 99.3% | 92.7% |
| 3461433 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.57 | 44.0 | 3.85e-01 | 82.4% | 73.2% |
| 3789473 | 5069.1.1.4 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ferric_reduct | 0.56 | 48.0 | 4.09e-01 | 93.0% | 83.4% |
| 3406938 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.54 | 42.0 | 3.85e-01 | 83.1% | 74.2% |
D2
medium
residues 147-259
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.81 | 74.0 | 7.25e-01 | 96.5% | 98.3% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 51.0 | 4.66e-01 | 73.5% | 94.6% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 50.0 | 4.65e-01 | 71.7% | 93.5% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.71 | 53.0 | 5.03e-01 | 95.6% | 67.2% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.70 | 61.0 | 5.95e-01 | 93.8% | 95.2% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.70 | 51.0 | 5.37e-01 | 95.6% | 86.0% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 49.0 | 4.70e-01 | 75.2% | 87.7% |
| 3lomA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.67 | 57.0 | 4.29e-01 | 94.7% | 48.6% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.67 | 60.0 | 5.36e-01 | 98.2% | 82.7% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.67 | 55.0 | 5.38e-01 | 97.3% | 81.5% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.66 | 57.0 | 5.57e-01 | 95.6% | 97.6% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.66 | 57.0 | 5.52e-01 | 100.0% | 85.2% |
| 3pwxA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.65 | 56.0 | 4.78e-01 | 94.7% | 69.0% |
| 3zsuA00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.65 | 56.0 | 5.55e-01 | 94.7% | 95.8% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.65 | 45.0 | 4.50e-01 | 75.2% | 69.8% |
| 1nzeA00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.64 | 53.0 | 5.39e-01 | 90.3% | 95.5% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.64 | 55.0 | 5.20e-01 | 93.8% | 86.5% |
| 3nftA00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.64 | 56.0 | 4.27e-01 | 96.5% | 94.3% |
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 46.0 | 4.34e-01 | 75.2% | 72.1% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 44.0 | 3.89e-01 | 71.7% | 79.0% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 45.0 | 3.97e-01 | 98.2% | 52.5% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 43.0 | 3.84e-01 | 71.7% | 78.5% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.62 | 44.0 | 4.23e-01 | 74.3% | 68.7% |
| 4cmyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 43.0 | 3.81e-01 | 71.7% | 78.5% |
| 1ihgA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 44.0 | 4.02e-01 | 98.2% | 57.9% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 42.0 | 4.23e-01 | 71.7% | 78.1% |
| 1c17M00 | 1.20.120.220 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A | 0.59 | 51.0 | 4.76e-01 | 96.5% | 96.5% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 42.0 | 3.84e-01 | 74.3% | 94.7% |
| 4xpwA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.59 | 51.0 | 4.91e-01 | 96.5% | 86.3% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 34.0 | 3.94e-01 | 97.3% | 77.6% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 46.0 | 3.61e-01 | 97.3% | 41.9% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.58 | 46.0 | 3.34e-01 | 85.0% | 84.8% |
| 2hz8A00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.58 | 49.0 | 4.91e-01 | 94.7% | 98.3% |
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 41.0 | 3.87e-01 | 74.3% | 64.7% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.57 | 40.0 | 3.74e-01 | 72.6% | 76.8% |
| 6lw5A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 47.0 | 3.59e-01 | 95.6% | 84.1% |
| 5an3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 47.0 | 4.48e-01 | 89.4% | 90.7% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.55 | 45.0 | 4.11e-01 | 89.4% | 67.5% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 40.0 | 4.09e-01 | 76.1% | 96.3% |
| 1w99A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.55 | 49.0 | 4.29e-01 | 100.0% | 90.2% |
| 2qgmA03 | 1.20.1440.30 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain | 0.54 | 46.0 | 4.57e-01 | 90.3% | 92.2% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 46.0 | 3.92e-01 | 93.8% | 66.9% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 46.0 | 3.96e-01 | 94.7% | 68.6% |
| 1oxjA02 | 1.25.40.170 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain | 0.51 | 40.0 | 4.10e-01 | 97.3% | 87.2% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043455 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.84 | 76.0 | 5.55e-01 | 96.5% | 43.2% |
| 5058966 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.84 | 75.0 | 5.53e-01 | 95.6% | 45.6% |
| 5072228 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.83 | 75.0 | 5.36e-01 | 96.5% | 40.6% |
| 4224814 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.83 | 75.0 | 5.52e-01 | 96.5% | 45.1% |
| 4073768 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.82 | 73.0 | 5.37e-01 | 96.5% | 44.6% |
| 5027868 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.81 | 74.0 | 5.47e-01 | 97.3% | 43.7% |
| 4979998 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.81 | 72.0 | 5.36e-01 | 96.5% | 41.8% |
| 4588682 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.80 | 71.0 | 5.09e-01 | 96.5% | 40.3% |
| 5028986 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.79 | 71.0 | 5.21e-01 | 96.5% | 42.8% |
| 5074080 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.78 | 70.0 | 5.02e-01 | 97.3% | 46.7% |
| 4443602 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.78 | 69.0 | 5.14e-01 | 96.5% | 41.5% |
| 5044603 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.77 | 70.0 | 5.13e-01 | 98.2% | 41.8% |
| 5056279 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.77 | 70.0 | 5.13e-01 | 97.3% | 47.9% |
| 4987762 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.76 | 52.0 | 5.08e-01 | 73.5% | 65.0% |
| 4416001 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.76 | 68.0 | 5.07e-01 | 97.3% | 41.5% |
| 3806852 | 109.62.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › AFF4 C-terminal homology domain › AFF4 C-terminal homology domain › THD_CWZF3-5-7 | 0.76 | 65.0 | 5.28e-01 | 91.2% | 85.7% |
| 3268501 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.73 | 65.0 | 4.79e-01 | 97.3% | 40.7% |
| 3519581 | 604.12.1.4 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 | 0.72 | 51.0 | 4.79e-01 | 72.6% | 80.0% |
| 4017640 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.72 | 53.0 | 5.41e-01 | 75.2% | 86.1% |
| 4076972 | 5069.1.1.28 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DmsC | 0.71 | 63.0 | 5.33e-01 | 95.6% | 81.6% |
| 3587934 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.71 | 51.0 | 4.01e-01 | 73.5% | 89.9% |
| 3580282 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.71 | 50.0 | 4.92e-01 | 72.6% | 75.8% |
| 4037098 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.70 | 58.0 | 5.94e-01 | 98.2% | 91.8% |
| 3536637 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.70 | 49.0 | 4.56e-01 | 72.6% | 67.1% |
| 3642682 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.69 | 50.0 | 4.99e-01 | 75.2% | 96.5% |
| 5050045 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.68 | 60.0 | 5.40e-01 | 93.8% | 93.3% |
| 5020411 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.68 | 60.0 | 5.42e-01 | 95.6% | 87.3% |
| 3912101 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.67 | 47.0 | 4.96e-01 | 71.7% | 84.0% |
| 4946565 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 48.0 | 4.74e-01 | 74.3% | 95.8% |
| 3492369 | 622.4.1.21 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Frag1 | 0.66 | 48.0 | 4.68e-01 | 74.3% | 100.0% |
| 4927880 | 601.16.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase | 0.66 | 57.0 | 5.67e-01 | 93.8% | 91.3% |
| 4354894 | 192.29.1.125 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cytochrom_C_asm | 0.66 | 56.0 | 5.25e-01 | 92.9% | 95.0% |
| 3487223 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.66 | 48.0 | 5.14e-01 | 75.2% | 94.7% |
| 3498895 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.66 | 57.0 | 5.25e-01 | 95.6% | 87.6% |
| 138117 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.66 | 57.0 | 5.52e-01 | 100.0% | 85.2% |
| 3283790 | 150.7.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE | 0.65 | 46.0 | 4.62e-01 | 72.6% | 83.5% |
| 3567382 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 47.0 | 4.73e-01 | 75.2% | 95.7% |
| 3562523 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.65 | 46.0 | 3.99e-01 | 72.6% | 81.2% |
| 3615244 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 46.0 | 4.10e-01 | 74.3% | 83.1% |
| 4942306 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.64 | 54.0 | 5.49e-01 | 92.0% | 100.0% |
| 3874768 | 192.29.1.127 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › ApoL | 0.63 | 50.0 | 5.01e-01 | 95.6% | 82.6% |
| 4950911 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 39.0 | 3.62e-01 | 72.6% | 49.0% |
| 5044407 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.63 | 53.0 | 4.75e-01 | 92.0% | 69.4% |
| 3410814 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.63 | 45.0 | 4.33e-01 | 74.3% | 66.4% |
| 3469936 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.62 | 50.0 | 3.78e-01 | 86.7% | 87.5% |
| 3227583 | 5050.1.1.48 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Frag1 | 0.62 | 53.0 | 4.36e-01 | 94.7% | 66.7% |
| 5050919 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 45.0 | 4.57e-01 | 77.0% | 99.1% |
| 3900923 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.59 | 41.0 | 4.36e-01 | 72.6% | 91.0% |
| 3580290 | 150.1.1.126 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF28643 | 0.59 | 43.0 | 3.70e-01 | 77.0% | 62.8% |
| 3246324 | 4266.3.1.0 ↗ | alpha bundles › Hyaluronidase domain-like › FLJ32549 domain-like › FLJ32549 domain-like | 0.58 | 42.0 | 3.68e-01 | 87.6% | 50.6% |
| 3205696 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.57 | 45.0 | 4.23e-01 | 83.2% | 87.4% |
| 5044572 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.56 | 41.0 | 4.25e-01 | 76.1% | 98.1% |
| 3257840 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.55 | 40.0 | 3.54e-01 | 75.2% | 69.7% |
| 3378683 | 1075.4.1.30 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_tran | 0.55 | 42.0 | 2.77e-01 | 81.4% | 100.0% |
| 4027360 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.55 | 49.0 | 3.76e-01 | 100.0% | 88.3% |
| 3564419 | 603.1.1.98 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 | 0.54 | 50.0 | 4.04e-01 | 100.0% | 82.9% |
| 3219759 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 36.0 | 3.48e-01 | 72.6% | 64.4% |
| 5006162 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.51 | 44.0 | 3.73e-01 | 96.5% | 75.4% |