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IMGVR_UViG_3300005398_000266-3300005398-Ga0066858_1000123415
Arc-VirIMGVR_UViG_3300005398_000266-3300005398-Ga0066858_1000123415
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-82
Domain cluster:
rep: IMGVR_UViG_3300030091_000003-3300030091-Ga0188179_1035714__D17-102
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rznA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.63 | 56.0 | 4.57e-01 | 100.0% | 61.3% |
| 5ktaA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 45.0 | 3.47e-01 | 79.7% | 54.5% |
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 52.0 | 4.52e-01 | 100.0% | 68.5% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.59 | 46.0 | 3.37e-01 | 83.5% | 37.4% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 53.0 | 4.42e-01 | 100.0% | 61.7% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 3.93e-01 | 100.0% | 65.7% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.02e-01 | 100.0% | 72.6% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 49.0 | 4.46e-01 | 100.0% | 71.9% |
| 3viuA04 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.58 | 41.0 | 3.16e-01 | 74.7% | 90.8% |
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.57 | 44.0 | 4.16e-01 | 84.8% | 96.0% |
| 2gmqA00 | 2.40.450.10 | Mainly Beta › Beta Barrel › PUA domain-like fold › PUA domain-like domain | 0.57 | 47.0 | 4.44e-01 | 96.2% | 93.9% |
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.55 | 40.0 | 3.81e-01 | 79.7% | 92.9% |
| 2kyyA00 | 3.30.950.30 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain | 0.54 | 43.0 | 3.52e-01 | 87.3% | 75.2% |
| 1zkkB00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.53 | 40.0 | 3.21e-01 | 81.0% | 76.4% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 44.0 | 4.09e-01 | 98.7% | 80.6% |
| 2oyrA01 | 3.40.1630.10 | Alpha Beta › 3-Layer(aba) Sandwich › S-adenosyl-L-methionine-dependent methyltransferases › YhiQ-like domain | 0.51 | 34.0 | 3.97e-01 | 96.2% | 100.0% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 41.0 | 3.48e-01 | 92.4% | 61.2% |
| 2cxiA03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.50 | 33.0 | 3.50e-01 | 75.9% | 77.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5013988 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 71.0 | 5.98e-01 | 100.0% | 72.3% |
| 5035744 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.68 | 61.0 | 5.24e-01 | 100.0% | 78.4% |
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.61 | 53.0 | 4.32e-01 | 97.5% | 76.0% |
| 4046812 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.61 | 47.0 | 3.59e-01 | 83.5% | 39.5% |
| 5016197 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.61 | 44.0 | 4.00e-01 | 97.5% | 55.5% |
| 3322835 | 304.20.1.5 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f | 0.61 | 41.0 | 2.95e-01 | 72.2% | 23.9% |
| 3612386 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.59 | 48.0 | 4.36e-01 | 91.1% | 93.6% |
| 4173931 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.59 | 44.0 | 4.16e-01 | 79.7% | 93.7% |
| 3898366 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.59 | 48.0 | 4.46e-01 | 91.1% | 98.0% |
| 3958547 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 43.0 | 4.61e-01 | 97.5% | 95.4% |
| 4378688 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.58 | 43.0 | 4.10e-01 | 79.7% | 93.7% |
| 3971323 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.58 | 49.0 | 4.48e-01 | 96.2% | 80.0% |
| 3200218 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 52.0 | 3.81e-01 | 100.0% | 44.2% |
| 3252896 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.58 | 43.0 | 4.12e-01 | 81.0% | 96.8% |
| 4066041 | 304.55.2.7 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f | 0.58 | 39.0 | 2.85e-01 | 72.2% | 25.0% |
| 4029028 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.57 | 42.0 | 3.98e-01 | 79.7% | 90.0% |
| 4341607 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.57 | 44.0 | 4.12e-01 | 82.3% | 91.8% |
| 3960499 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.57 | 45.0 | 4.66e-01 | 97.5% | 94.7% |
| 3274159 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 40.0 | 3.55e-01 | 73.4% | 60.0% |
| 2794379 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.57 | 42.0 | 4.02e-01 | 81.0% | 89.5% |
| 3940984 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.57 | 44.0 | 2.92e-01 | 82.3% | 74.8% |
| 4082853 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.56 | 43.0 | 4.11e-01 | 82.3% | 94.7% |
| 3280135 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.56 | 47.0 | 4.39e-01 | 96.2% | 92.4% |
| 3723708 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 44.0 | 3.35e-01 | 100.0% | 35.6% |
| 3959530 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.55 | 46.0 | 4.32e-01 | 98.7% | 92.4% |
| 4417276 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.54 | 41.0 | 3.84e-01 | 82.3% | 97.0% |
| 3976933 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 49.0 | 4.05e-01 | 98.7% | 77.0% |
| 4977312 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 43.0 | 3.66e-01 | 97.5% | 52.6% |
| 3958925 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.54 | 45.0 | 4.47e-01 | 96.2% | 96.5% |
| 4024554 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.53 | 40.0 | 3.77e-01 | 82.3% | 96.9% |
| 4147631 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.53 | 40.0 | 4.17e-01 | 82.3% | 94.7% |
| 3528113 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.53 | 42.0 | 3.34e-01 | 88.6% | 64.1% |
| 4454798 | 5104.1.1.8 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › PF27238 | 0.52 | 45.0 | 4.07e-01 | 100.0% | 71.2% |
| 4989442 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.51 | 40.0 | 3.23e-01 | 92.4% | 82.6% |