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IMGVR_UViG_3300005398_000266-3300005398-Ga0066858_100012345
Arc-VirIMGVR_UViG_3300005398_000266-3300005398-Ga0066858_100012345
Identity
- Kingdom:
- archaea
Quality
81.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-74
Domain cluster:
rep: IMGVR_UViG_3300002484_001677-3300002484-JGI25129J35166_10014223__D2-70
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 44.0 | 4.42e-01 | 76.7% | 77.3% |
| 4hstB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.54 | 34.0 | 3.58e-01 | 82.2% | 69.1% |
| 1qqgA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 37.0 | 3.34e-01 | 72.6% | 56.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1112010 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.61 | 44.0 | 4.42e-01 | 76.7% | 77.3% |
| 3171728 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.56 | 41.0 | 3.38e-01 | 80.8% | 71.0% |
| 1245465 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.52 | 31.0 | 3.60e-01 | 94.5% | 86.0% |
| 3999975 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.52 | 31.0 | 3.12e-01 | 100.0% | 57.3% |
| 3736955 | 3497.1.1.0 ↗ | beta barrels › Replication foci-targeting sequence N-terminal domain › Replication foci-targeting sequence N-terminal domain › Replication foci-targeting sequence N-terminal domain | 0.52 | 45.0 | 3.84e-01 | 100.0% | 83.2% |
| 4032268 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 30.0 | 2.83e-01 | 72.6% | 43.8% |
| 3962855 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 43.0 | 3.81e-01 | 98.6% | 98.2% |
| 3557314 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.50 | 35.0 | 2.97e-01 | 75.3% | 73.3% |
| 3677172 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.50 | 34.0 | 3.40e-01 | 72.6% | 71.2% |
D2
medium
residues 100-206
Domain cluster:
rep: KX077891.1__ANM47467.1__X__00041__D5-136
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080963 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 54.0 | 6.06e-01 | 83.2% | 98.8% |
| 3172297 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.66 | 38.0 | 4.76e-01 | 70.1% | 100.0% |
| 3358852 | 3755.4.1.62 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF31016 | 0.53 | 41.0 | 3.62e-01 | 82.2% | 94.2% |
| 3203936 | 109.4.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3 | 0.52 | 46.0 | 3.39e-01 | 96.3% | 78.1% |