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IMGVR_UViG_3300005422_000008-3300005422-Ga0066829_1000155113

Arc-Vir

IMGVR_UViG_3300005422_000008-3300005422-Ga0066829_1000155113

Identity

Kingdom:
archaea

Quality

73.4 mean pLDDT

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 46-144
PDB
Domain cluster: rep: MG752970.1__AVH85358.1__RsoM2USA_430__00430__D11-89
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00166.27 best Cpn10 43.3 4.20e-11 95.0% 95.7%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6mrc100 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.74 64.0 6.46e-01 97.0% 93.0%
1p3hB00 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.69 61.0 6.13e-01 97.0% 95.9%
1g31A00 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.65 59.0 5.72e-01 96.0% 94.4%
1s7hA01 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 38.0 4.14e-01 98.0% 80.0%
3fbgA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.58 50.0 4.03e-01 100.0% 48.7%
1yb5A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.58 51.0 4.34e-01 100.0% 59.6%
1kohA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 36.0 3.69e-01 98.0% 66.0%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 33.0 3.68e-01 91.9% 77.0%
4gi2B01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.54 50.0 3.62e-01 100.0% 47.0%
3pi7A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.54 49.0 3.85e-01 100.0% 49.0%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.53 32.0 3.48e-01 88.9% 73.8%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 29.0 3.66e-01 77.8% 90.3%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3594024 236.1.2.0 ↗ beta barrels › GroES-like › GroES-related › GroES 0.82 69.0 7.21e-01 97.0% 96.7%
3175923 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.82 72.0 7.25e-01 97.0% 93.0%
3674955 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.80 55.0 6.12e-01 93.9% 87.5%
4147631 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.79 55.0 6.35e-01 94.9% 94.7%
3359945 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.77 62.0 6.34e-01 96.0% 87.6%
4182470 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.77 66.0 6.84e-01 96.0% 95.7%
4341607 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.75 64.0 6.52e-01 96.0% 93.9%
4378688 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.74 64.0 6.51e-01 96.0% 96.8%
2794379 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.74 60.0 6.16e-01 96.0% 90.5%
3938500 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.73 61.0 6.39e-01 92.9% 98.9%
3508217 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.73 65.0 6.31e-01 97.0% 95.5%
4029028 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.73 64.0 6.46e-01 97.0% 93.0%
4417276 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.72 65.0 6.49e-01 94.9% 96.0%
3252896 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.71 63.0 6.40e-01 94.9% 97.9%
4082853 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.71 61.0 6.28e-01 96.0% 95.7%
2794380 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.69 56.0 5.85e-01 94.9% 92.5%
4173931 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.67 58.0 5.99e-01 97.0% 97.9%
4995717 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.66 60.0 5.67e-01 97.0% 91.2%
4024554 236.1.2.1 ↗ beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.64 56.0 5.72e-01 94.9% 95.9%
4016191 236.1.1.0 ↗ beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.63 51.0 4.13e-01 100.0% 47.2%
3942715 3609.1.1.0 ↗ alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain 0.58 32.0 3.70e-01 94.9% 76.9%
3689038 236.1.1.1 ↗ beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.56 51.0 4.27e-01 100.0% 60.0%
3274176 236.1.1.1 ↗ beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.56 51.0 4.24e-01 100.0% 59.8%
3946675 236.1.1.2 ↗ beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.54 49.0 4.13e-01 100.0% 60.6%
4234915 1.1.5.26 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN 0.50 33.0 3.23e-01 96.0% 58.3%