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IMGVR_UViG_3300005423_000115-3300005423-Ga0066828_100035822

Arc-Vir

IMGVR_UViG_3300005423_000115-3300005423-Ga0066828_100035822

Identity

Kingdom:
archaea

Quality

89.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-105
PDB
Domain cluster: rep: OR553905.1__WNN95053.1__SEA_MAGRITTE_76__00076__D29-130
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l1oF01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 63.0 5.43e-01 100.0% 68.7%
3u50C01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 61.0 5.40e-01 100.0% 81.1%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 47.0 5.24e-01 100.0% 95.3%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 43.0 4.80e-01 100.0% 96.8%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 42.0 4.62e-01 100.0% 96.9%
1ctfA00 3.30.1390.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.56 38.0 4.14e-01 88.2% 91.2%
7zhgO01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.55 39.0 4.27e-01 88.2% 93.9%
1sxjA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.55 34.0 3.67e-01 83.5% 73.6%
3bdlA03 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 46.0 4.12e-01 100.0% 64.8%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 49.0 4.70e-01 100.0% 89.8%
1k92A02 3.90.1260.10 Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 0.53 46.0 3.53e-01 100.0% 66.0%
3cjrB01 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.53 39.0 4.17e-01 100.0% 92.9%
1wibA00 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.52 37.0 3.67e-01 100.0% 69.6%
6rarI02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 45.0 4.50e-01 98.8% 100.0%
8d8lM01 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.52 39.0 3.98e-01 83.5% 85.2%
1eovA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 44.0 3.85e-01 100.0% 66.4%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283647 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.90 85.0 7.32e-01 100.0% 94.4%
3614614 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 67.0 5.18e-01 100.0% 91.6%
4934600 259.2.1.0 ↗ a+b two layers › Ribosomal protein L31e-like › Reductive activator for corrinoid/iron-sulfur protein second domain › Reductive activator for corrinoid/iron-sulfur protein second domain 0.73 52.0 5.72e-01 100.0% 90.0%
3591196 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 65.0 5.02e-01 98.8% 96.2%
3931699 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.72 66.0 5.41e-01 100.0% 67.3%
4952032 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 63.0 5.26e-01 100.0% 85.2%
3585962 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.70 65.0 5.18e-01 100.0% 72.5%
5051439 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.68 61.0 5.19e-01 100.0% 89.3%
3678706 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 61.0 5.29e-01 98.8% 76.2%
5064368 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 61.0 5.44e-01 100.0% 84.2%
4954096 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.68 60.0 5.04e-01 100.0% 89.9%
4948171 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 60.0 5.04e-01 100.0% 90.3%
4975883 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 59.0 5.11e-01 100.0% 76.3%
4038661 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.67 46.0 5.07e-01 100.0% 93.8%
4119533 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.66 45.0 5.04e-01 98.8% 100.0%
4028871 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.65 45.0 4.84e-01 100.0% 84.9%
5014319 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 48.0 5.27e-01 98.8% 100.0%
3397821 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 55.0 4.34e-01 100.0% 73.2%
4678731 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.63 43.0 4.77e-01 100.0% 93.8%
4066623 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.63 43.0 4.80e-01 98.8% 100.0%
3475605 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 52.0 4.21e-01 91.8% 87.5%
4928964 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.61 52.0 4.71e-01 100.0% 69.6%
3407636 2.1.1.37 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.61 43.0 4.54e-01 98.8% 85.3%
4510334 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.61 53.0 4.65e-01 97.6% 65.6%
5059549 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.55 43.0 4.31e-01 84.7% 97.6%
4281411 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.55 42.0 4.21e-01 83.5% 96.5%
5015063 7523.1.1.3 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 0.54 41.0 2.81e-01 81.2% 98.7%
4960632 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.54 41.0 4.28e-01 98.8% 88.7%
5041518 102.2.1.4 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.53 38.0 3.77e-01 77.6% 87.4%
3676003 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.51 42.0 3.66e-01 94.1% 87.9%
4532012 102.2.1.4 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.51 41.0 4.14e-01 98.8% 89.4%
5066824 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.51 40.0 4.17e-01 88.2% 93.8%
D2 high residues 236-326
PDB
Domain cluster: rep: IMGVR_UViG_3300005426_000124-3300005426-Ga0066847_100040541__D57-146
D3 medium residues 110-125_188-221
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pqgA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.66 57.0 3.97e-01 100.0% 77.6%
2ywlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 53.0 3.77e-01 96.0% 93.0%
3qxbA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.62 52.0 3.30e-01 100.0% 93.9%
1hbkA00 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.57 47.0 4.00e-01 96.0% 92.1%
1m4uA02 1.10.287.520 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.56 40.0 3.80e-01 76.0% 76.3%
1l9fA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 44.0 3.10e-01 100.0% 65.1%
1dgnA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.53 44.0 3.71e-01 100.0% 53.9%
3mk7A00 1.20.210.10 Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain 0.52 43.0 2.58e-01 100.0% 18.7%
1cy9A01 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.51 45.0 3.42e-01 100.0% 75.4%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4534734 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.66 49.0 3.64e-01 80.0% 84.8%
4110764 5050.1.1.10 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 0.64 41.0 2.55e-01 92.0% 12.5%
4229793 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.63 52.0 4.29e-01 100.0% 96.1%
5024430 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.63 45.0 2.75e-01 76.0% 54.5%
3633385 1015.1.1.1 ↗ alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › INSIG 0.62 51.0 3.51e-01 92.0% 44.7%
3718455 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.58 51.0 3.95e-01 100.0% 66.7%
4619002 4177.1.1.66 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › ATG17_like 0.56 49.0 3.04e-01 100.0% 58.0%
5083349 601.15.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Proteasome activator reg(alpha) › Proteasome activator reg(alpha) 0.54 42.0 3.34e-01 88.0% 59.1%
3963876 2007.2.3.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › BLH_phosphatase 0.53 41.0 3.01e-01 86.0% 56.6%
3969687 3755.3.1.461 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › MksF 0.50 44.0 2.83e-01 100.0% 62.7%
D4 medium residues 126-187
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.73 65.0 4.41e-01 98.4% 31.1%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.73 63.0 4.74e-01 95.2% 84.0%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.71 56.0 4.01e-01 98.4% 29.7%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 60.0 4.49e-01 95.2% 74.0%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.68 61.0 3.73e-01 100.0% 32.7%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.68 39.0 3.89e-01 72.6% 54.5%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.67 58.0 3.59e-01 100.0% 31.9%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.67 50.0 5.07e-01 93.5% 86.4%
2bi0A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 56.0 4.29e-01 95.2% 87.1%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.65 56.0 4.58e-01 100.0% 81.1%
3ejvA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 55.0 4.11e-01 95.2% 87.4%
2chcC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 55.0 4.11e-01 95.2% 69.2%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.65 43.0 3.66e-01 75.8% 42.9%
4rljA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 53.0 4.13e-01 96.8% 95.8%
3f7sA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 52.0 4.08e-01 95.2% 78.2%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 53.0 4.19e-01 95.2% 82.4%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 42.0 3.21e-01 77.4% 28.4%
2uvaG08 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 53.0 3.46e-01 98.4% 64.8%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.62 47.0 3.63e-01 83.9% 44.6%
7c5yA02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 52.0 3.97e-01 95.2% 93.5%
7c5wA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 52.0 4.00e-01 95.2% 93.2%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 51.0 4.12e-01 93.5% 85.8%
3omlA03 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 50.0 3.39e-01 95.2% 68.3%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.61 51.0 3.79e-01 96.8% 49.4%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 50.0 4.06e-01 96.8% 93.0%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 43.0 3.49e-01 85.5% 38.3%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 48.0 3.16e-01 95.2% 62.8%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 44.0 3.56e-01 80.6% 40.7%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.60 45.0 4.67e-01 95.2% 96.4%
3wewA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 49.0 3.36e-01 95.2% 71.2%
3cygA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.59 45.0 3.64e-01 82.3% 83.2%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 43.0 3.37e-01 82.3% 87.8%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.22e-01 98.4% 89.9%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.58 43.0 4.34e-01 95.2% 82.5%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 46.0 3.82e-01 95.2% 85.9%
3kg7B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.58 47.0 3.16e-01 96.8% 38.6%
4jhmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 42.0 3.51e-01 80.6% 48.7%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 47.0 2.96e-01 100.0% 43.4%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 46.0 3.63e-01 96.8% 71.4%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.57 48.0 3.71e-01 100.0% 76.8%
4uv3E01 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.57 47.0 3.40e-01 98.4% 66.5%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 47.0 3.68e-01 95.2% 55.8%
4hrzB00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 3.79e-01 95.2% 48.8%
3b7kC02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 45.0 3.90e-01 95.2% 98.2%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.56 46.0 3.66e-01 95.2% 55.2%
2r76A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.56 46.0 3.72e-01 96.8% 81.1%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.56 42.0 3.89e-01 91.9% 63.1%
4n4rB00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.55 45.0 3.54e-01 96.8% 72.8%
1a21A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 3.37e-01 74.2% 77.6%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 41.0 4.09e-01 91.9% 76.1%
5e1vB00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.55 45.0 3.01e-01 95.2% 39.8%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.54 43.0 3.20e-01 95.2% 94.9%
4hrvA00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.54 44.0 3.57e-01 96.8% 82.7%
3kulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 43.0 3.91e-01 90.3% 88.8%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 43.0 3.66e-01 90.3% 56.9%
4e72A01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.54 42.0 3.58e-01 95.2% 91.1%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 43.0 3.54e-01 95.2% 85.0%
2v5yA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.64e-01 87.1% 85.6%
7u7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.20e-01 72.6% 75.3%
1jkfA03 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 39.0 4.02e-01 91.9% 90.0%
3r8qA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.21e-01 74.2% 67.4%
3uizB00 2.60.40.1570 Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin 0.51 37.0 2.97e-01 80.6% 82.1%
6ya6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 42.0 3.69e-01 98.4% 93.9%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5071182 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.75 65.0 5.00e-01 95.2% 97.0%
3263153 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.72 61.0 4.48e-01 93.5% 85.0%
5048849 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.71 60.0 4.50e-01 95.2% 91.6%
3225351 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.71 62.0 3.89e-01 98.4% 27.7%
4664187 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.70 59.0 4.45e-01 95.2% 80.0%
5072264 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.67 57.0 4.11e-01 96.8% 73.5%
3840563 11.1.1.67 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.67 58.0 4.27e-01 100.0% 60.6%
3829053 243.1.1.49 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 0.66 56.0 4.34e-01 96.8% 72.1%
3937491 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 54.0 4.35e-01 98.4% 77.0%
2785694 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.65 54.0 4.33e-01 95.2% 79.7%
3720297 222.1.1.20 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N 0.65 54.0 4.09e-01 96.8% 86.9%
3279685 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.65 54.0 3.81e-01 95.2% 69.0%
3017638 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.64 57.0 3.38e-01 100.0% 37.2%
3500606 868.1.1.3 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.64 53.0 3.87e-01 95.2% 84.3%
5071382 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.63 52.0 4.11e-01 95.2% 95.0%
3960870 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.63 52.0 3.92e-01 95.2% 86.3%
1308671 222.1.1.20 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N 0.62 50.0 4.01e-01 91.9% 93.9%
3781788 222.1.1.27 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 0.62 51.0 3.85e-01 95.2% 83.6%
3271847 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 51.0 4.21e-01 95.2% 89.0%
4110452 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.61 50.0 3.78e-01 95.2% 80.6%
3726361 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.69e-01 96.8% 68.9%
1916888 3698.1.1.2 ↗ beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C 0.61 49.0 3.59e-01 93.5% 57.6%
4836844 2003.1.5.132 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PRMT_C 0.61 49.0 3.61e-01 93.5% 58.8%
5068089 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.61 48.0 4.07e-01 91.9% 53.0%
3579994 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 48.0 3.94e-01 88.7% 78.3%
4202460 243.3.1.5 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.61 45.0 4.01e-01 88.7% 55.6%
4929404 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.60 42.0 3.54e-01 72.6% 70.5%
3785652 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.60 50.0 3.78e-01 95.2% 82.5%
4942841 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.60 51.0 4.26e-01 100.0% 83.5%
3553322 5089.1.1.3 ↗ beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Gasdermin 0.60 48.0 3.32e-01 93.5% 55.9%
3727006 243.1.1.9 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF1348 0.60 49.0 3.73e-01 95.2% 63.4%
5030887 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.60 46.0 3.58e-01 91.9% 36.0%
4342757 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.60 50.0 3.80e-01 98.4% 95.6%
3687104 10.1.1.15 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_12 0.59 49.0 3.34e-01 98.4% 97.8%
5025077 3414.1.1.0 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.59 48.0 4.95e-01 95.2% 95.0%
3915698 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 42.0 3.91e-01 79.0% 90.6%
5049047 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 47.0 3.78e-01 90.3% 45.6%
4870077 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.58 47.0 3.79e-01 95.2% 82.5%
3254982 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.58 42.0 4.09e-01 79.0% 80.0%
3245642 7026.1.1.0 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.58 48.0 3.45e-01 100.0% 64.1%
4424375 222.1.1.28 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27762 0.58 47.0 3.91e-01 95.2% 94.2%
4999867 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.58 44.0 3.34e-01 88.7% 32.1%
3957635 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.57 44.0 3.87e-01 87.1% 79.0%
3962753 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.57 45.0 4.04e-01 90.3% 92.6%
3693142 109.4.1.681 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.57 48.0 2.96e-01 98.4% 63.7%
3749143 243.3.1.20 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 0.57 46.0 3.82e-01 95.2% 62.4%
3903091 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.57 41.0 2.57e-01 83.9% 12.6%
4479763 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.57 46.0 4.10e-01 93.5% 69.5%
5043598 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 46.0 3.68e-01 95.2% 51.4%
3943050 274.1.1.51 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › PF27121 0.57 46.0 3.51e-01 96.8% 59.4%
5016736 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 42.0 3.64e-01 83.9% 75.2%
3990454 298.1.1.15 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_C 0.56 44.0 3.08e-01 90.3% 99.1%
3817727 295.1.1.44 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF29049 0.56 48.0 4.21e-01 98.4% 81.1%
3847303 5084.5.1.67 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Hobbit 0.56 46.0 3.39e-01 96.8% 50.5%
3484227 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.56 45.0 3.39e-01 93.5% 40.6%
3283651 222.1.1.9 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.56 43.0 3.55e-01 88.7% 63.2%
3843944 243.5.1.7 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AKAP28 0.55 44.0 3.69e-01 95.2% 63.2%
4529819 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.55 41.0 3.33e-01 83.9% 43.0%
5047908 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.55 41.0 2.61e-01 82.3% 38.8%
4033933 9.9.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.55 44.0 3.73e-01 95.2% 67.8%
4582509 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.54 42.0 2.91e-01 88.7% 40.0%
3914722 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 39.0 3.72e-01 79.0% 100.0%
3928775 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.54 45.0 3.32e-01 95.2% 58.9%
5036729 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.54 47.0 3.79e-01 98.4% 56.7%
3928228 2484.1.1.43 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.53 39.0 2.72e-01 83.9% 27.9%
3587340 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 42.0 3.86e-01 93.5% 88.2%
3782925 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 42.0 3.71e-01 91.9% 65.3%
5054019 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 41.0 4.02e-01 93.5% 92.9%
3933349 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 38.0 3.31e-01 79.0% 69.0%
3396431 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 39.0 3.43e-01 90.3% 84.5%
3541127 2.1.1.170 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_OB2 0.51 40.0 3.76e-01 83.9% 84.0%
3175966 283.1.1.3 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase 0.51 40.0 3.38e-01 91.9% 58.8%