IMGVR_UViG_3300005423_000152-3300005423-Ga0066828_100054901

Arc-Vir

Identity

65.7 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-128

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ffjA01	1.10.8.380	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1	0.62	34.0	4.34e-01	93.7%	92.9%
3mcrA00	3.30.460.80	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit	0.59	53.0	4.52e-01	100.0%	72.7%
2zueA01	3.30.1360.70	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain	0.55	44.0	4.15e-01	88.4%	73.9%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3925884	3226.1.1.3 ↗	alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › HCO3_cotransp	0.56	48.0	3.13e-01	96.8%	61.3%
4000746	223.2.1.5 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7	0.52	33.0	3.44e-01	100.0%	67.4%
3647962	216.1.1.3 ↗	a+b two layers › UBC-like › UBC-like › UBC-like › UEV	0.52	40.0	3.59e-01	87.4%	88.3%

D2 medium residues 133-229

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2elcA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.58	37.0	4.20e-01	94.8%	92.5%
2jokA01	1.10.4120.10	Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain	0.56	40.0	3.39e-01	76.3%	56.6%
3hl6A02	1.20.58.700	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.54	36.0	3.48e-01	70.1%	73.0%
1svmA01	1.10.10.510	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain	0.52	43.0	4.49e-01	95.9%	100.0%
2f5jB00	1.10.274.30	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › MRG domain	0.51	38.0	3.32e-01	80.4%	65.4%
2di3B02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.50	43.0	3.76e-01	97.9%	71.6%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2889550	4995.1.1.0 ↗	alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like	0.59	36.0	3.90e-01	85.6%	71.4%
3172462	375.10.1.1 ↗	few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol	0.56	36.0	3.42e-01	75.3%	53.3%
3701680	4953.1.1.0 ↗	beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like	0.52	40.0	4.02e-01	84.5%	92.9%
4044907	3076.1.1.1 ↗	alpha arrays › Putative triphosphoribosyl-dephospho-coA synthase › Putative triphosphoribosyl-dephospho-coA synthase › Putative triphosphoribosyl-dephospho-coA synthase › CitG	0.51	41.0	3.00e-01	88.7%	82.4%

D3 medium residues 230-291

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1cw1A00	3.40.718.10	Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase	0.61	42.0	2.58e-01	72.6%	90.8%
6erkA01	3.90.1150.10	Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1	0.56	43.0	3.31e-01	87.1%	61.0%
4uhwA09	3.30.365.10	Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain	0.54	47.0	4.12e-01	100.0%	83.3%
2pdoA01	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.52	43.0	3.58e-01	100.0%	71.8%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5038017	3016.1.1.2 ↗	a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3	0.56	42.0	3.79e-01	80.6%	100.0%
3377062	323.1.1.7 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase	0.55	38.0	2.62e-01	74.2%	87.2%
5078078	2006.1.1.6 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_phosphat_B	0.54	40.0	2.90e-01	83.9%	93.1%
3740184	213.1.1.1 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1	0.52	43.0	3.46e-01	100.0%	79.3%
3394140	3722.1.1.1 ↗	alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1	0.52	38.0	2.49e-01	79.0%	19.3%
3179767	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.51	41.0	2.70e-01	96.8%	48.9%
3356970	3016.1.1.0 ↗	a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases	0.51	38.0	3.24e-01	82.3%	89.1%

D4 medium residues 292-350

PDB