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IMGVR_UViG_3300005423_000196-3300005423-Ga0066828_100076072
Arc-VirIMGVR_UViG_3300005423_000196-3300005423-Ga0066828_100076072
Identity
- Kingdom:
- archaea
Quality
77.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-41
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.78 | 59.0 | 6.12e-01 | 97.5% | 94.4% |
| 3aa0B01 | 1.20.58.570 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain | 0.61 | 46.0 | 3.74e-01 | 100.0% | 40.9% |
| 1fx2A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.61 | 48.0 | 3.09e-01 | 97.5% | 96.2% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.61 | 50.0 | 3.13e-01 | 97.5% | 51.9% |
| 1rmdA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.61 | 40.0 | 4.16e-01 | 100.0% | 90.0% |
| 2jl8102 | 3.30.160.850 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 50.0 | 4.90e-01 | 97.5% | 95.6% |
| 4yg6B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 41.0 | 2.77e-01 | 75.0% | 17.8% |
| 3u3pA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.59 | 43.0 | 3.60e-01 | 92.5% | 41.0% |
| 3nkgA00 | 2.60.120.790 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 45.0 | 3.10e-01 | 95.0% | 90.6% |
| 2b9dA01 | 3.30.160.330 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 43.0 | 4.42e-01 | 100.0% | 89.7% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 45.0 | 2.77e-01 | 97.5% | 19.9% |
| 4p1mB01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.56 | 42.0 | 4.18e-01 | 97.5% | 82.2% |
| 4l8nA03 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 42.0 | 2.96e-01 | 95.0% | 31.1% |
| 2xigA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.55 | 44.0 | 4.04e-01 | 92.5% | 94.5% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.55 | 43.0 | 4.00e-01 | 90.0% | 77.4% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 39.0 | 2.84e-01 | 87.5% | 48.6% |
| 4p04A01 | 2.60.40.3100 | Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain | 0.54 | 42.0 | 3.27e-01 | 97.5% | 69.8% |
| 4ijdA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 37.0 | 3.83e-01 | 97.5% | 96.8% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 36.0 | 2.43e-01 | 77.5% | 17.4% |
| 2czrA02 | 3.90.79.30 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › TBP-interacting protein, C-terminal domain | 0.53 | 38.0 | 2.79e-01 | 100.0% | 25.8% |
| 3bwnD01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 43.0 | 3.01e-01 | 97.5% | 91.0% |
| 2cnzA00 | 2.60.40.1570 | Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin | 0.53 | 43.0 | 3.19e-01 | 100.0% | 52.0% |
| 1d7bA00 | 2.60.40.1210 | Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain | 0.52 | 40.0 | 2.74e-01 | 95.0% | 62.2% |
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.52 | 40.0 | 3.63e-01 | 90.0% | 71.7% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.52 | 42.0 | 2.87e-01 | 100.0% | 30.7% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.52 | 40.0 | 3.39e-01 | 92.5% | 62.8% |
| 2bm0A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 36.0 | 3.39e-01 | 75.0% | 96.1% |
| 5w0kA01 | 3.90.380.20 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II | 0.52 | 39.0 | 2.44e-01 | 97.5% | 66.5% |
| 5jxsA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 40.0 | 2.93e-01 | 100.0% | 53.5% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.51 | 39.0 | 3.16e-01 | 100.0% | 78.0% |
| 4rayA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.50 | 41.0 | 3.90e-01 | 95.0% | 96.0% |
| 2ebnA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 35.0 | 2.21e-01 | 80.0% | 96.1% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5040368 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 63.0 | 6.68e-01 | 97.5% | 94.3% |
| 4512216 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 64.0 | 5.99e-01 | 100.0% | 70.0% |
| 4990345 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 68.0 | 6.44e-01 | 100.0% | 78.0% |
| 5034626 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 62.0 | 6.29e-01 | 97.5% | 87.5% |
| 4982902 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 62.0 | 6.22e-01 | 100.0% | 87.5% |
| 3504586 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.77 | 64.0 | 4.29e-01 | 100.0% | 24.5% |
| 5027350 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.77 | 66.0 | 4.56e-01 | 100.0% | 29.7% |
| 3330803 | 375.1.1.144 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › YABBY_N | 0.77 | 62.0 | 6.08e-01 | 100.0% | 86.7% |
| 3307036 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.77 | 63.0 | 5.91e-01 | 92.5% | 74.0% |
| 3426409 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.76 | 52.0 | 5.76e-01 | 72.5% | 100.0% |
| 4928795 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 63.0 | 6.12e-01 | 100.0% | 84.4% |
| 3387951 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 60.0 | 6.01e-01 | 97.5% | 90.0% |
| 3706365 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 62.0 | 5.82e-01 | 92.5% | 96.0% |
| 4982792 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.76 | 64.0 | 4.29e-01 | 100.0% | 25.0% |
| 5032187 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 63.0 | 5.81e-01 | 100.0% | 87.3% |
| 4964333 | 375.1.1.339 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7560 | 0.76 | 63.0 | 6.37e-01 | 100.0% | 92.5% |
| 1933336 | 375.1.1.50 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_4 | 0.75 | 58.0 | 5.72e-01 | 92.5% | 81.4% |
| 4959999 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 61.0 | 5.95e-01 | 97.5% | 88.9% |
| 3599921 | 375.3.1.0 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger | 0.75 | 60.0 | 5.36e-01 | 100.0% | 62.5% |
| 3278973 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.74 | 59.0 | 5.92e-01 | 100.0% | 92.5% |
| 5038157 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 58.0 | 5.72e-01 | 100.0% | 82.2% |
| 3730501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 62.0 | 6.01e-01 | 100.0% | 86.7% |
| 5051574 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 61.0 | 5.48e-01 | 100.0% | 78.3% |
| 3414868 | 375.3.1.1 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-DNL | 0.73 | 59.0 | 4.83e-01 | 100.0% | 47.1% |
| 4025629 | 375.3.1.1 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-DNL | 0.73 | 58.0 | 4.80e-01 | 100.0% | 47.1% |
| 3440950 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.73 | 59.0 | 5.92e-01 | 92.5% | 92.5% |
| 4927429 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 57.0 | 5.77e-01 | 100.0% | 92.5% |
| 5072544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 58.0 | 5.26e-01 | 97.5% | 73.3% |
| 3235875 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.72 | 56.0 | 4.76e-01 | 97.5% | 51.4% |
| 3497994 | 375.1.1.208 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-DNL | 0.72 | 57.0 | 5.50e-01 | 100.0% | 80.0% |
| 3946860 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 58.0 | 5.57e-01 | 100.0% | 80.0% |
| 3668267 | 375.1.1.208 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-DNL | 0.71 | 57.0 | 5.49e-01 | 100.0% | 80.0% |
| 5051204 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 58.0 | 5.19e-01 | 97.5% | 76.7% |
| 4988079 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 58.0 | 5.68e-01 | 97.5% | 86.7% |
| 4991835 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 58.0 | 5.53e-01 | 100.0% | 92.0% |
| 2793102 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 54.0 | 5.64e-01 | 97.5% | 100.0% |
| 3454406 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.70 | 59.0 | 5.53e-01 | 97.5% | 78.0% |
| 5003964 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 58.0 | 5.23e-01 | 100.0% | 91.7% |
| 3832396 | 375.1.1.134 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Cys_rich_CPXG | 0.70 | 60.0 | 4.83e-01 | 100.0% | 50.0% |
| 3600775 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 57.0 | 5.60e-01 | 100.0% | 86.7% |
| 3276937 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 54.0 | 5.62e-01 | 100.0% | 97.1% |
| 3204003 | 375.1.1.81 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_10 | 0.69 | 58.0 | 5.61e-01 | 97.5% | 86.7% |
| 5058894 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 55.0 | 5.42e-01 | 100.0% | 86.7% |
| 3376010 | 375.3.1.1 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-DNL | 0.67 | 52.0 | 4.92e-01 | 97.5% | 70.9% |
| 4221958 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.65 | 53.0 | 5.22e-01 | 100.0% | 88.9% |
| 4181029 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.65 | 53.0 | 5.10e-01 | 100.0% | 81.6% |
| 3971566 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.65 | 53.0 | 5.22e-01 | 100.0% | 91.1% |
| 4294893 | 375.1.1.240 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_Brz | 0.63 | 49.0 | 4.54e-01 | 100.0% | 93.3% |
| 5043484 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 46.0 | 4.59e-01 | 100.0% | 77.8% |
| 4993599 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.62 | 52.0 | 3.77e-01 | 100.0% | 32.8% |
| 4929843 | 4123.1.1.0 ↗ | few secondary structure elements › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 C-terminal domain-like | 0.61 | 47.0 | 4.59e-01 | 100.0% | 100.0% |
| 3670750 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 52.0 | 3.70e-01 | 97.5% | 32.5% |
| 3465479 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.61 | 52.0 | 3.15e-01 | 97.5% | 15.0% |
| 3445272 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 46.0 | 2.74e-01 | 90.0% | 17.7% |
| 4963987 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.60 | 50.0 | 3.08e-01 | 97.5% | 34.8% |
| None | — | 0.60 | 52.0 | 3.32e-01 | 97.5% | 21.1% | |
| 3167912 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 51.0 | 4.92e-01 | 97.5% | 86.7% |
| 5050527 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 46.0 | 4.59e-01 | 100.0% | 86.7% |
| 5052386 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 49.0 | 4.91e-01 | 95.0% | 95.0% |
| 3255511 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.59 | 50.0 | 3.21e-01 | 97.5% | 20.5% |
| 4964214 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.59 | 43.0 | 3.97e-01 | 92.5% | 60.0% |
| 3627228 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 49.0 | 4.64e-01 | 97.5% | 78.0% |
| 3918540 | 386.1.1.281 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF27082 | 0.58 | 46.0 | 4.64e-01 | 97.5% | 100.0% |
| 3995563 | 375.1.1.89 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like | 0.55 | 46.0 | 4.27e-01 | 92.5% | 74.0% |
| 3783937 | 7516.1.1.18 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Anp1 | 0.51 | 41.0 | 2.50e-01 | 92.5% | 36.8% |
| 4966886 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.51 | 36.0 | 3.24e-01 | 82.5% | 92.3% |