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IMGVR_UViG_3300005426_000009-3300005426-Ga0066847_1000048911
Arc-VirIMGVR_UViG_3300005426_000009-3300005426-Ga0066847_1000048911
Identity
- Kingdom:
- archaea
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 24-43_132-191_654-681
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 39.0 | 4.03e-01 | 77.8% | 67.3% |
| 5ha6B00 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 38.0 | 4.38e-01 | 77.8% | 87.3% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 37.0 | 3.80e-01 | 82.4% | 64.7% |
| 4cgkA01 | 6.10.250.3150 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 49.0 | 3.89e-01 | 89.8% | 80.8% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 38.0 | 4.36e-01 | 88.0% | 93.4% |
| 2d4uB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.57 | 42.0 | 3.76e-01 | 99.1% | 54.2% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 33.0 | 3.76e-01 | 86.1% | 78.0% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 31.0 | 3.59e-01 | 87.0% | 78.5% |
| 3purA03 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 26.0 | 2.65e-01 | 77.8% | 44.5% |
| 6wlvB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 31.0 | 2.35e-01 | 100.0% | 25.0% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.50 | 39.0 | 3.37e-01 | 81.5% | 56.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3547040 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 52.0 | 4.48e-01 | 86.1% | 90.0% |
| 3609510 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.61 | 48.0 | 4.03e-01 | 84.3% | 83.2% |
| 4254111 | 633.13.1.1 ↗ | alpha bundles › Bromodomain-like › DsbB-like › DsbB-like › DsbB | 0.59 | 38.0 | 3.41e-01 | 92.6% | 48.3% |
| 3397986 | 3755.4.1.1 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 | 0.58 | 44.0 | 3.76e-01 | 80.6% | 90.6% |
| 3497316 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.57 | 45.0 | 3.95e-01 | 84.3% | 100.0% |
| 3637243 | 5094.1.1.3 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › DUF2458 | 0.57 | 43.0 | 4.09e-01 | 80.6% | 88.5% |
| 3951393 | 191.1.1.8 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_33 | 0.55 | 34.0 | 3.14e-01 | 88.0% | 47.9% |
| 3499106 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.54 | 38.0 | 2.55e-01 | 92.6% | 18.6% |
| 4025990 | 3748.1.1.3 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C | 0.54 | 44.0 | 4.31e-01 | 88.0% | 88.3% |
| 3666909 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 38.0 | 3.27e-01 | 89.8% | 49.7% |
| 3784752 | 3748.1.1.3 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C | 0.51 | 41.0 | 3.96e-01 | 88.0% | 92.8% |
| 3766090 | 633.7.1.5 ↗ | alpha bundles › Bromodomain-like › Bacillus cereus metalloprotein-like › Bacillus cereus metalloprotein-like › Piezo_TM1-24 | 0.51 | 40.0 | 3.49e-01 | 82.4% | 64.5% |
D2
medium
residues 44-131
Domain cluster:
rep: KX119197.1__ANT42944.1__X__00020__D49-119
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wojA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 44.0 | 3.33e-01 | 78.4% | 94.3% |
| 3uw3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 42.0 | 3.22e-01 | 77.3% | 92.8% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.57 | 42.0 | 3.24e-01 | 80.7% | 88.6% |
| 3d3aA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 43.0 | 3.84e-01 | 87.5% | 93.3% |
| 2ya0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 40.0 | 3.82e-01 | 87.5% | 67.3% |
| 6bs6B01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 33.0 | 3.32e-01 | 87.5% | 63.0% |
| 6h05A00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 37.0 | 2.87e-01 | 80.7% | 83.1% |
| 3vx8A01 | 3.40.140.100 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 C-terminal domain | 0.50 | 34.0 | 3.00e-01 | 70.5% | 85.8% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.50 | 40.0 | 3.91e-01 | 88.6% | 87.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083772 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.71 | 58.0 | 4.92e-01 | 87.5% | 68.6% |
| 3288052 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.56 | 41.0 | 3.38e-01 | 79.5% | 69.7% |
| 4105812 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.56 | 45.0 | 3.90e-01 | 87.5% | 90.6% |
| 3988813 | 12.1.1.37 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › SpuA_C | 0.54 | 39.0 | 3.70e-01 | 88.6% | 62.7% |
| 4949994 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.80e-01 | 87.5% | 91.7% |
| 3287423 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 39.0 | 3.28e-01 | 81.8% | 74.5% |
| 4026943 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 38.0 | 3.49e-01 | 93.2% | 59.2% |
| 3497288 | 12.5.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 | 0.51 | 40.0 | 3.40e-01 | 86.4% | 56.8% |
| 3274281 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 40.0 | 3.52e-01 | 85.2% | 99.2% |
| 3577090 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.51 | 42.0 | 4.37e-01 | 100.0% | 100.0% |
| 4566585 | 10.12.1.6 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 | 0.50 | 44.0 | 3.24e-01 | 97.7% | 94.9% |
| 5054813 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.50 | 37.0 | 2.92e-01 | 80.7% | 50.0% |
D3
medium
residues 192-258
D4
medium
residues 336-379_398-417
Domain cluster:
representative
D5
medium
residues 491-653
Domain cluster:
representative