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IMGVR_UViG_3300005443_000009-3300005443-Ga0074258_1140504
Arc-VirIMGVR_UViG_3300005443_000009-3300005443-Ga0074258_1140504
Identity
- Kingdom:
- archaea
Quality
84.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-99
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xi7B02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.75 | 57.0 | 6.18e-01 | 87.2% | 100.0% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.70 | 52.0 | 4.42e-01 | 83.0% | 59.3% |
| 1r79A01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.69 | 58.0 | 5.51e-01 | 93.6% | 89.1% |
| 1v87A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 57.0 | 4.83e-01 | 100.0% | 80.0% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 49.0 | 4.33e-01 | 76.6% | 52.2% |
| 2yhoE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 47.0 | 4.09e-01 | 74.5% | 48.6% |
| 2l31A00 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.67 | 54.0 | 4.25e-01 | 95.7% | 57.1% |
| 1y8fA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.67 | 55.0 | 5.46e-01 | 95.7% | 96.1% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 47.0 | 4.20e-01 | 76.6% | 52.2% |
| 2csvA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.60 | 43.0 | 3.78e-01 | 80.9% | 50.0% |
| 2fnoA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 47.0 | 3.92e-01 | 97.9% | 95.7% |
| 1pocA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.58 | 39.0 | 2.79e-01 | 70.2% | 29.1% |
| 5mmjp00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.55 | 38.0 | 3.23e-01 | 74.5% | 95.0% |
| 3gv4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 44.0 | 3.56e-01 | 95.7% | 52.5% |
| 1npdB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.53 | 42.0 | 3.20e-01 | 100.0% | 84.1% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3706296 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.81 | 61.0 | 5.30e-01 | 80.9% | 62.9% |
| 4028462 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.80 | 56.0 | 6.39e-01 | 78.7% | 100.0% |
| 3670642 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.80 | 60.0 | 5.38e-01 | 80.9% | 58.5% |
| 3229366 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.80 | 59.0 | 5.60e-01 | 78.7% | 72.7% |
| 3874356 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.79 | 59.0 | 6.06e-01 | 78.7% | 86.7% |
| 3816895 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.79 | 55.0 | 5.86e-01 | 72.3% | 85.0% |
| 3522312 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.79 | 60.0 | 5.67e-01 | 80.9% | 74.5% |
| 3813196 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.79 | 58.0 | 6.17e-01 | 80.9% | 100.0% |
| 3357823 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.78 | 59.0 | 5.40e-01 | 80.9% | 68.3% |
| 3606453 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.78 | 65.0 | 6.24e-01 | 93.6% | 92.7% |
| 3820281 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.78 | 66.0 | 6.45e-01 | 91.5% | 100.0% |
| 3791278 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.78 | 58.0 | 5.32e-01 | 78.7% | 68.3% |
| 4853380 | 376.1.1.35 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_14 | 0.78 | 64.0 | 5.31e-01 | 93.6% | 55.3% |
| 3806562 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.78 | 57.0 | 5.87e-01 | 80.9% | 82.2% |
| 3368882 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.77 | 58.0 | 6.21e-01 | 78.7% | 92.5% |
| 3312159 | 904.1.1.27 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box, ANCHR-like_BBOX | 0.77 | 60.0 | 4.51e-01 | 83.0% | 37.1% |
| 3411064 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.76 | 52.0 | 5.14e-01 | 72.3% | 68.0% |
| 3662931 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.76 | 56.0 | 5.55e-01 | 78.7% | 74.0% |
| 3666739 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.75 | 55.0 | 4.83e-01 | 76.6% | 56.9% |
| 3245220 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.75 | 54.0 | 5.14e-01 | 76.6% | 69.1% |
| 3713600 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.75 | 58.0 | 4.58e-01 | 80.9% | 43.3% |
| 3998169 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.75 | 55.0 | 4.83e-01 | 76.6% | 56.9% |
| 3815420 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.74 | 62.0 | 5.94e-01 | 93.6% | 100.0% |
| 3803133 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.74 | 59.0 | 4.64e-01 | 91.5% | 47.6% |
| 3782724 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.74 | 54.0 | 5.03e-01 | 76.6% | 62.7% |
| 3744594 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.74 | 52.0 | 4.20e-01 | 76.6% | 38.9% |
| 3851083 | 376.1.6.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain | 0.73 | 53.0 | 5.19e-01 | 78.7% | 72.0% |
| 3594276 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.73 | 53.0 | 5.46e-01 | 78.7% | 86.7% |
| 4148983 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.73 | 52.0 | 4.71e-01 | 76.6% | 55.4% |
| 3541494 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.73 | 53.0 | 4.88e-01 | 76.6% | 62.7% |
| 3613485 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.73 | 53.0 | 5.23e-01 | 80.9% | 74.0% |
| 3993815 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.72 | 52.0 | 4.10e-01 | 78.7% | 36.0% |
| 3251626 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.72 | 52.0 | 4.43e-01 | 76.6% | 62.7% |
| 3550389 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.72 | 62.0 | 5.86e-01 | 95.7% | 81.8% |
| 4529546 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.71 | 51.0 | 3.96e-01 | 76.6% | 34.3% |
| 4515977 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.70 | 50.0 | 3.80e-01 | 76.6% | 31.3% |
| 3663056 | 376.1.1.74 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RING_XB3-XBAT31 | 0.70 | 49.0 | 4.56e-01 | 76.6% | 58.3% |
| 4026888 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.70 | 50.0 | 2.99e-01 | 76.6% | 10.0% |
| 4278845 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.70 | 49.0 | 3.08e-01 | 74.5% | 13.7% |
| 3812096 | 105.2.1.11 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C › zf-C3HC4_3 | 0.70 | 49.0 | 3.07e-01 | 74.5% | 13.5% |
| 3779926 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.70 | 50.0 | 4.37e-01 | 76.6% | 49.3% |
| 3684350 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.70 | 49.0 | 3.25e-01 | 76.6% | 17.6% |
| 3348384 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.70 | 50.0 | 4.38e-01 | 76.6% | 51.4% |
| 3690337 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.69 | 50.0 | 4.28e-01 | 76.6% | 48.0% |
| 3180912 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.69 | 50.0 | 3.37e-01 | 76.6% | 20.7% |
| 4488278 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.69 | 49.0 | 3.62e-01 | 76.6% | 27.7% |
| 3551494 | 904.1.1.26 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box_Trim66 | 0.69 | 50.0 | 5.18e-01 | 78.7% | 82.2% |
| 3238073 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.69 | 58.0 | 5.40e-01 | 95.7% | 85.0% |
| 3464292 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.69 | 49.0 | 3.35e-01 | 76.6% | 21.3% |
| 4110773 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.69 | 49.0 | 2.78e-01 | 76.6% | 6.6% |
| 4595968 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 49.0 | 4.41e-01 | 76.6% | 55.4% |
| 4507147 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.68 | 49.0 | 2.98e-01 | 76.6% | 12.2% |
| 4669021 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.68 | 49.0 | 3.61e-01 | 76.6% | 28.8% |
| 3485528 | 5046.1.1.194 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › zf-C3HC4 | 0.68 | 48.0 | 3.04e-01 | 76.6% | 13.8% |
| 4612989 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.68 | 49.0 | 3.57e-01 | 76.6% | 27.7% |
| 3845514 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.68 | 56.0 | 5.26e-01 | 93.6% | 78.3% |
| 3416902 | 192.8.1.119 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › zf-C3HC4 | 0.68 | 48.0 | 2.92e-01 | 76.6% | 11.5% |
| 4263665 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 48.0 | 4.67e-01 | 78.7% | 74.5% |
| 4564843 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.68 | 48.0 | 3.65e-01 | 76.6% | 31.6% |
| 3511172 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 48.0 | 3.16e-01 | 76.6% | 17.6% |
| 4630831 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 48.0 | 3.92e-01 | 76.6% | 40.0% |
| 3570018 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.67 | 48.0 | 2.92e-01 | 76.6% | 11.4% |
| 3700937 | 377.9.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT | 0.65 | 44.0 | 4.68e-01 | 74.5% | 82.5% |
| 3895908 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.65 | 51.0 | 5.16e-01 | 89.4% | 97.8% |
| 3276133 | 377.9.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT | 0.63 | 42.0 | 3.93e-01 | 74.5% | 55.0% |
| 3313353 | 377.9.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT | 0.62 | 46.0 | 4.39e-01 | 80.9% | 80.0% |
| 3232866 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 50.0 | 4.62e-01 | 97.9% | 96.9% |
| 3541495 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.60 | 46.0 | 4.62e-01 | 95.7% | 89.6% |
| 4295539 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.54 | 38.0 | 2.97e-01 | 74.5% | 72.4% |
| 4047807 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.53 | 37.0 | 3.08e-01 | 74.5% | 89.4% |
| 3239380 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.52 | 39.0 | 3.89e-01 | 93.6% | 82.0% |