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IMGVR_UViG_3300005508_000028-3300005508-Ga0066868_100013684
Arc-VirIMGVR_UViG_3300005508_000028-3300005508-Ga0066868_100013684
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 435-531
Domain cluster:
rep: IMGVR_UViG_3300009618_000197-3300009618-Ga0116127_100143130__D382-476
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 56.0 | 5.37e-01 | 94.8% | 88.1% |
| 4n21E00 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 51.0 | 4.75e-01 | 94.8% | 70.2% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 50.0 | 4.34e-01 | 95.9% | 77.0% |
| 2bx2L02 | 3.40.1260.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › Ribonuclease E, catalytic domain | 0.56 | 27.0 | 2.62e-01 | 100.0% | 37.3% |
| 7wu7501 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 44.0 | 4.14e-01 | 95.9% | 88.9% |
| 1iktA00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.51 | 23.0 | 2.22e-01 | 77.3% | 33.9% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.50 | 43.0 | 3.98e-01 | 95.9% | 85.2% |
| 2o8bB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.50 | 45.0 | 4.02e-01 | 95.9% | 78.6% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3511359 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.72 | 65.0 | 4.51e-01 | 99.0% | 53.0% |
| 4954546 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.67 | 60.0 | 4.29e-01 | 100.0% | 58.6% |
| 4265142 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 59.0 | 5.01e-01 | 94.8% | 79.3% |
| 3409778 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 57.0 | 5.19e-01 | 93.8% | 92.3% |
| 3703290 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 57.0 | 4.88e-01 | 92.8% | 78.7% |
| 3390284 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 58.0 | 4.92e-01 | 94.8% | 78.4% |
| 5079691 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.65 | 57.0 | 5.10e-01 | 95.9% | 90.4% |
| 3398317 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.65 | 57.0 | 4.80e-01 | 94.8% | 83.7% |
| 4969864 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.65 | 57.0 | 5.14e-01 | 95.9% | 93.8% |
| 5038348 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.65 | 57.0 | 4.99e-01 | 94.8% | 85.7% |
| 5064664 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 56.0 | 5.27e-01 | 95.9% | 100.0% |
| 4996551 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 57.0 | 4.99e-01 | 95.9% | 95.7% |
| 4160852 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 57.0 | 5.01e-01 | 95.9% | 89.1% |
| 4985469 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 57.0 | 5.05e-01 | 94.8% | 100.0% |
| 3614646 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 56.0 | 4.70e-01 | 92.8% | 91.0% |
| 4973468 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 57.0 | 4.98e-01 | 94.8% | 77.9% |
| 3616294 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 53.0 | 4.87e-01 | 88.7% | 88.0% |
| 3896368 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 56.0 | 4.83e-01 | 95.9% | 82.4% |
| 4936526 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 55.0 | 4.90e-01 | 94.8% | 99.3% |
| 5060418 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 56.0 | 5.19e-01 | 94.8% | 80.0% |
| 5008906 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 57.0 | 4.89e-01 | 95.9% | 86.9% |
| 4976532 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 56.0 | 5.03e-01 | 94.8% | 83.1% |
| 5079975 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 54.0 | 4.70e-01 | 92.8% | 92.4% |
| 4283629 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 55.0 | 5.01e-01 | 95.9% | 93.8% |
| 5056505 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 55.0 | 5.23e-01 | 94.8% | 92.2% |
| 4938398 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 55.0 | 4.80e-01 | 94.8% | 73.1% |
| 4532543 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 56.0 | 4.87e-01 | 94.8% | 95.7% |
| 4945806 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.63 | 55.0 | 5.12e-01 | 95.9% | 100.0% |
| 4941487 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.63 | 55.0 | 5.14e-01 | 94.8% | 88.3% |
| 4967223 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 55.0 | 4.94e-01 | 95.9% | 81.2% |
| 3575976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 55.0 | 4.77e-01 | 94.8% | 77.9% |
| 5029396 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 55.0 | 5.21e-01 | 94.8% | 92.2% |
| 4993906 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 55.0 | 4.83e-01 | 94.8% | 75.7% |
| 4303742 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 55.0 | 5.11e-01 | 94.8% | 88.3% |
| 4118829 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 54.0 | 4.79e-01 | 94.8% | 93.6% |
| 3800501 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 55.0 | 4.73e-01 | 94.8% | 77.9% |
| 3942126 | 4038.1.1.8 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Abc1-like | 0.61 | 54.0 | 3.85e-01 | 99.0% | 58.4% |
| 4140340 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 54.0 | 4.64e-01 | 94.8% | 68.7% |
| 3599620 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 54.0 | 5.10e-01 | 94.8% | 92.2% |
| 4191334 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 54.0 | 4.85e-01 | 95.9% | 88.8% |
| 3371570 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 52.0 | 4.54e-01 | 94.8% | 83.3% |
| 4942428 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 54.0 | 4.80e-01 | 94.8% | 78.5% |
| 3489283 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 51.0 | 4.64e-01 | 93.8% | 93.3% |
| 5027984 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 54.0 | 4.99e-01 | 94.8% | 88.3% |
| 4990636 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 54.0 | 4.94e-01 | 99.0% | 91.5% |
| 5066236 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 54.0 | 4.73e-01 | 99.0% | 97.2% |
| 5040546 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 52.0 | 4.46e-01 | 94.8% | 75.8% |
| 4281419 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 52.0 | 4.62e-01 | 95.9% | 93.5% |
| 3583546 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 52.0 | 4.66e-01 | 95.9% | 77.8% |
| 4982168 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 50.0 | 4.62e-01 | 95.9% | 90.0% |
| 5082704 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.59 | 54.0 | 4.24e-01 | 100.0% | 96.9% |
| 5022380 | 3755.3.1.632 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin | 0.58 | 50.0 | 4.48e-01 | 95.9% | 83.6% |
| 3592209 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 49.0 | 4.71e-01 | 92.8% | 100.0% |
| 3519635 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 49.0 | 4.75e-01 | 93.8% | 100.0% |
| 3191834 | 4207.1.1.1 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med21 | 0.58 | 51.0 | 4.49e-01 | 95.9% | 68.6% |
| 3212393 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 49.0 | 4.71e-01 | 92.8% | 100.0% |
| 3603899 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 49.0 | 4.44e-01 | 94.8% | 83.0% |
| 3932006 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 49.0 | 4.68e-01 | 94.8% | 97.4% |
| 4983091 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 49.0 | 4.39e-01 | 94.8% | 83.7% |
| 4974744 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.56 | 45.0 | 3.74e-01 | 86.6% | 49.7% |
| 4934732 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.56 | 49.0 | 4.58e-01 | 95.9% | 97.5% |
| 4392278 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.56 | 47.0 | 3.97e-01 | 91.8% | 56.1% |
| 4420884 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.51 | 42.0 | 3.32e-01 | 89.7% | 43.5% |
D2
medium
residues 574-664
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ohxA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 37.0 | 2.79e-01 | 70.3% | 68.0% |