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IMGVR_UViG_3300005520_000084-3300005520-Ga0066864_100026371
Arc-VirIMGVR_UViG_3300005520_000084-3300005520-Ga0066864_100026371
Identity
- Kingdom:
- archaea
Quality
96.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-88
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16754.11 best | Pesticin | 49.9 | 4.80e-13 | 66.3% | 35.9% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4aqnA02 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.92 | 84.0 | 6.21e-01 | 100.0% | 42.5% |
| 152lA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.74 | 63.0 | 5.11e-01 | 100.0% | 49.4% |
| 5dsgA01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.73 | 63.0 | 5.86e-01 | 100.0% | 76.4% |
| 8hp8A01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.71 | 63.0 | 5.15e-01 | 100.0% | 54.2% |
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 47.0 | 4.04e-01 | 76.7% | 74.3% |
| 2pziB03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 43.0 | 3.65e-01 | 72.1% | 85.3% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 46.0 | 4.38e-01 | 77.9% | 99.0% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.62 | 45.0 | 4.06e-01 | 76.7% | 83.3% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.62 | 45.0 | 3.82e-01 | 79.1% | 67.5% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.61 | 42.0 | 3.99e-01 | 70.9% | 70.6% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 42.0 | 4.29e-01 | 80.2% | 91.4% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.53 | 39.0 | 3.92e-01 | 76.7% | 92.0% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 45.0 | 4.14e-01 | 100.0% | 74.8% |
| 4jlxA01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.51 | 42.0 | 3.37e-01 | 93.0% | 90.2% |
| 2jbyA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.50 | 35.0 | 3.15e-01 | 73.3% | 73.2% |
| 2z15A00 | 3.90.640.90 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain | 0.50 | 37.0 | 3.37e-01 | 79.1% | 81.5% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 975914 | 235.1.1.22 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Pesticin | 0.92 | 83.0 | 6.12e-01 | 98.8% | 41.8% |
| 3838959 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.79 | 65.0 | 5.94e-01 | 96.5% | 68.2% |
| 2665501 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.77 | 66.0 | 5.17e-01 | 100.0% | 45.5% |
| 156965 | 235.1.1.7 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme,Gp5_OB | 0.75 | 64.0 | 4.76e-01 | 100.0% | 37.0% |
| 2456732 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.75 | 64.0 | 5.74e-01 | 100.0% | 67.5% |
| 2099820 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.72 | 59.0 | 5.98e-01 | 96.5% | 90.7% |
| 3814234 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.66 | 48.0 | 4.15e-01 | 75.6% | 86.2% |
| 3929825 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.66 | 49.0 | 4.38e-01 | 79.1% | 87.5% |
| 3823125 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.65 | 49.0 | 4.08e-01 | 80.2% | 72.0% |
| 3736610 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 48.0 | 4.58e-01 | 86.0% | 68.0% |
| 3806463 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.64 | 46.0 | 3.80e-01 | 75.6% | 77.4% |
| 3652633 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.62 | 45.0 | 3.94e-01 | 76.7% | 79.2% |
| 3830809 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.62 | 46.0 | 4.14e-01 | 79.1% | 77.5% |
| 3319537 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.61 | 45.0 | 3.77e-01 | 79.1% | 65.6% |
| 3644047 | 109.4.1.1130 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_BSK1_C | 0.60 | 43.0 | 3.60e-01 | 75.6% | 75.5% |
| 3420292 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.59 | 52.0 | 4.33e-01 | 97.7% | 80.7% |
| 3925709 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 50.0 | 4.40e-01 | 100.0% | 88.6% |
| 3697273 | 109.3.1.179 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7708 | 0.59 | 44.0 | 3.42e-01 | 81.4% | 78.5% |
| 5057581 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.58 | 43.0 | 4.61e-01 | 89.5% | 92.0% |
| 3432279 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.54 | 48.0 | 4.02e-01 | 98.8% | 81.3% |
| 3806117 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.54 | 48.0 | 4.00e-01 | 100.0% | 81.3% |
| 3623733 | 102.1.2.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › Tcp11 | 0.54 | 40.0 | 3.34e-01 | 82.6% | 55.3% |
| 3642678 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.54 | 47.0 | 3.77e-01 | 97.7% | 78.2% |
| 3814534 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.54 | 48.0 | 4.00e-01 | 100.0% | 78.5% |
| 3314513 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.51 | 41.0 | 3.43e-01 | 90.7% | 95.1% |
| 3974488 | 532.2.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains | 0.51 | 31.0 | 3.14e-01 | 98.8% | 60.0% |
| 3803172 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.51 | 41.0 | 3.40e-01 | 90.7% | 93.8% |