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IMGVR_UViG_3300005520_000192-3300005520-Ga0066864_100021823
Arc-VirIMGVR_UViG_3300005520_000192-3300005520-Ga0066864_100021823
Identity
- Kingdom:
- archaea
Quality
88.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-131
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00034.27 best | Cytochrom_C | 36.9 | 1.00e-08 | 96.0% | 96.6% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ql3A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.97 | 93.0 | 9.35e-01 | 100.0% | 99.0% |
| 7tlx101 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.97 | 88.0 | 9.00e-01 | 93.0% | 100.0% |
| 1chhA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.97 | 94.0 | 9.10e-01 | 100.0% | 94.4% |
| 1fj0A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.94 | 88.0 | 8.37e-01 | 97.0% | 99.1% |
| 155cA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.86 | 82.0 | 7.32e-01 | 100.0% | 87.3% |
| 2c8sA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.84 | 66.0 | 5.64e-01 | 100.0% | 55.0% |
| 1w2lA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.81 | 74.0 | 7.52e-01 | 99.0% | 99.0% |
| 3cp5A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.81 | 71.0 | 6.66e-01 | 100.0% | 78.4% |
| 2yevB02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.81 | 69.0 | 5.15e-01 | 97.0% | 39.8% |
| 8gthB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.77 | 69.0 | 7.08e-01 | 96.0% | 100.0% |
| 1kb0A02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.77 | 59.0 | 6.11e-01 | 100.0% | 85.3% |
| 1c6rA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.77 | 60.0 | 6.37e-01 | 100.0% | 93.2% |
| 3wfdC00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.76 | 64.0 | 5.65e-01 | 100.0% | 62.7% |
| 4ljiB00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.75 | 66.0 | 5.93e-01 | 100.0% | 71.0% |
| 4pwaD00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.74 | 58.0 | 6.18e-01 | 100.0% | 93.1% |
| 1gq1A01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.73 | 57.0 | 5.78e-01 | 100.0% | 82.0% |
| 2zxyA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.72 | 58.0 | 6.28e-01 | 95.0% | 100.0% |
| 1cchA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.71 | 54.0 | 5.93e-01 | 96.0% | 98.8% |
| 4j20A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.69 | 55.0 | 5.81e-01 | 98.0% | 95.5% |
| 2xtsB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.69 | 58.0 | 5.12e-01 | 98.0% | 64.2% |
| 1e29A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.68 | 63.0 | 5.68e-01 | 100.0% | 74.8% |
| 4v2kA02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.68 | 57.0 | 5.67e-01 | 100.0% | 86.3% |
| 1h32B00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.67 | 62.0 | 5.58e-01 | 99.0% | 82.1% |
| 3orvA02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.67 | 61.0 | 4.93e-01 | 100.0% | 87.3% |
| 8gy3A01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.64 | 58.0 | 5.63e-01 | 98.0% | 99.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3593341 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.98 | 94.0 | 8.88e-01 | 99.0% | 88.7% |
| 3199295 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.97 | 94.0 | 8.28e-01 | 100.0% | 75.6% |
| 51477 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.97 | 94.0 | 9.12e-01 | 100.0% | 94.4% |
| 4635685 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.95 | 93.0 | 8.92e-01 | 100.0% | 92.7% |
| 4162632 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.95 | 92.0 | 7.95e-01 | 100.0% | 73.6% |
| 2865421 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.94 | 91.0 | 9.07e-01 | 100.0% | 100.0% |
| 4367588 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.94 | 90.0 | 7.92e-01 | 99.0% | 74.8% |
| 4077527 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.93 | 89.0 | 8.50e-01 | 100.0% | 99.1% |
| 51552 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.93 | 90.0 | 8.38e-01 | 100.0% | 99.1% |
| 4156652 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.89 | 84.0 | 7.66e-01 | 98.0% | 92.8% |
| 4340617 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.88 | 85.0 | 8.02e-01 | 100.0% | 100.0% |
| 4548664 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.85 | 62.0 | 6.72e-01 | 100.0% | 88.2% |
| 169332 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.81 | 71.0 | 6.66e-01 | 100.0% | 78.4% |
| 1172499 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.81 | 69.0 | 6.65e-01 | 97.0% | 81.1% |
| 3970379 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.79 | 68.0 | 6.88e-01 | 100.0% | 90.0% |
| 51437 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.77 | 61.0 | 6.44e-01 | 100.0% | 92.3% |
| 4295807 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.77 | 70.0 | 6.90e-01 | 100.0% | 92.4% |
| 3967693 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.76 | 61.0 | 5.90e-01 | 100.0% | 76.4% |
| 1557546 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.74 | 58.0 | 6.21e-01 | 100.0% | 94.2% |
| 3960046 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.73 | 57.0 | 5.03e-01 | 100.0% | 58.6% |
| 3951907 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.72 | 57.0 | 5.32e-01 | 100.0% | 68.3% |
| 3387284 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.70 | 63.0 | 5.49e-01 | 100.0% | 66.2% |
| None | — | 0.70 | 65.0 | 6.00e-01 | 100.0% | 81.5% | |
| 3029343 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.69 | 65.0 | 5.75e-01 | 100.0% | 73.7% |
| 5002472 | 107.1.1.3 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › FixO | 0.69 | 65.0 | 6.06e-01 | 100.0% | 89.2% |
| 3308601 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.69 | 60.0 | 5.98e-01 | 100.0% | 89.5% |
| 2469816 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.68 | 60.0 | 6.02e-01 | 100.0% | 95.0% |
| 3969651 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.63 | 55.0 | 5.04e-01 | 98.0% | 74.4% |
| 3181532 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.53 | 44.0 | 2.92e-01 | 92.0% | 97.3% |