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IMGVR_UViG_3300005532_000131-3300005532-Ga0070739_1000759116

Arc-Vir

IMGVR_UViG_3300005532_000131-3300005532-Ga0070739_1000759116

Quality

67.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-77
PDB
D2 high residues 89-160
PDB
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.75 67.0 6.33e-01 98.6% 90.8%
2v31A01 2.40.30.180 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain 0.74 66.0 5.97e-01 100.0% 83.5%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.73 65.0 6.01e-01 100.0% 92.3%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.72 60.0 6.10e-01 100.0% 94.4%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.69 61.0 5.43e-01 100.0% 93.3%
2crvA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.68 60.0 5.57e-01 100.0% 96.8%
3okxB00 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.68 59.0 4.69e-01 98.6% 80.5%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.67 59.0 5.43e-01 98.6% 92.6%
1vq8B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.67 58.0 4.77e-01 100.0% 88.3%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 58.0 5.52e-01 100.0% 97.6%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.67 58.0 5.14e-01 98.6% 100.0%
4b43A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.67 60.0 5.13e-01 100.0% 70.4%
3kw3B01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.66 58.0 4.65e-01 100.0% 70.1%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.66 57.0 4.07e-01 100.0% 31.4%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 3.85e-01 76.4% 68.1%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 4.42e-01 73.6% 77.5%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 43.0 4.53e-01 72.2% 90.5%
3fjsC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 40.0 3.57e-01 100.0% 45.8%
1r6vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 44.0 3.82e-01 91.7% 51.8%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 41.0 4.46e-01 98.6% 90.0%
5cu1A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 38.0 2.88e-01 100.0% 25.4%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.58 49.0 3.60e-01 100.0% 33.8%
3o14A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 48.0 3.37e-01 100.0% 29.7%
3hrpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 50.0 4.59e-01 98.6% 81.1%
5fljA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 40.0 3.06e-01 100.0% 30.2%
3ttyA02 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.56 40.0 2.97e-01 79.2% 79.5%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 3.98e-01 100.0% 78.9%
3ciaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.54 45.0 3.42e-01 100.0% 37.5%
1g43A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.54 46.0 3.67e-01 100.0% 61.9%
4csbA00 2.40.128.480 Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein 0.54 37.0 3.30e-01 73.6% 97.3%
1ydxA03 3.90.220.20 Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains 0.54 47.0 3.72e-01 100.0% 47.9%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.54 47.0 4.03e-01 100.0% 91.5%
2wstA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.54 45.0 3.53e-01 100.0% 72.7%
4aw7A03 2.60.120.1200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.91e-01 100.0% 66.4%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.88e-01 100.0% 91.0%
7rh9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 46.0 3.58e-01 100.0% 52.6%
4rz7A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 46.0 3.87e-01 100.0% 61.2%
2cdoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 45.0 3.70e-01 100.0% 54.3%
2o8qA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 44.0 3.68e-01 100.0% 55.7%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.60e-01 100.0% 88.1%
1l9mA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 4.07e-01 100.0% 84.5%
1hw5A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 45.0 3.72e-01 100.0% 62.0%
1iarB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.92e-01 100.0% 81.2%
2qcsB02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 44.0 3.72e-01 100.0% 64.0%
5c3pD00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.50 40.0 2.70e-01 90.3% 79.9%
1k12A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 42.0 3.39e-01 100.0% 50.6%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964292 1.1.13.38 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 0.89 84.0 7.10e-01 100.0% 66.4%
3973332 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.86 76.0 7.56e-01 100.0% 92.0%
3272448 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.82 76.0 6.83e-01 100.0% 86.3%
3944437 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.82 76.0 7.31e-01 100.0% 96.2%
4026674 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.81 74.0 7.15e-01 100.0% 92.5%
3712506 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.80 73.0 6.94e-01 100.0% 88.2%
3945528 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.80 73.0 7.09e-01 100.0% 92.5%
4217174 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.79 68.0 6.88e-01 100.0% 95.7%
1954233 11.21.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.78 72.0 6.68e-01 100.0% 96.6%
1714452 11.21.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.78 72.0 6.75e-01 100.0% 96.6%
3198544 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.78 71.0 6.04e-01 100.0% 93.0%
3512272 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 71.0 7.04e-01 100.0% 97.3%
4028468 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.77 70.0 6.13e-01 100.0% 75.2%
4521518 1.1.7.121 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Phage_BR0599 0.77 71.0 5.96e-01 100.0% 64.3%
1281033 1.1.7.33 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF4438 0.75 67.0 5.18e-01 100.0% 76.9%
199114 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.74 65.0 5.67e-01 100.0% 72.3%
4315769 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 67.0 5.74e-01 100.0% 83.6%
140548 1.1.7.13 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.73 64.0 4.96e-01 97.2% 77.6%
4890345 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 62.0 5.95e-01 100.0% 85.9%
4159958 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.70 63.0 5.40e-01 98.6% 79.1%
4361509 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.69 60.0 5.45e-01 98.6% 96.0%
4207197 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 61.0 5.52e-01 100.0% 97.0%
3506820 1.1.7.50 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 0.69 63.0 5.07e-01 100.0% 61.5%
4083044 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.69 61.0 6.10e-01 100.0% 96.0%
3945286 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 60.0 5.39e-01 100.0% 92.4%
1790393 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 61.0 5.91e-01 100.0% 87.8%
4943639 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 59.0 5.70e-01 100.0% 96.5%
5037792 3613.1.1.0 beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.68 54.0 5.12e-01 87.5% 94.1%
3976133 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 59.0 5.47e-01 100.0% 92.6%
1030933 1.1.7.29 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel 0.67 59.0 5.58e-01 100.0% 96.6%
4949379 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.67 59.0 5.36e-01 100.0% 91.0%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 47.0 5.06e-01 75.0% 95.0%
5064548 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.65 41.0 4.66e-01 72.2% 86.8%
5015757 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 57.0 5.31e-01 98.6% 96.7%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 45.0 3.54e-01 72.2% 34.8%
4452122 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.63 45.0 3.80e-01 76.4% 88.6%
4977697 4.1.1.95 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.62 45.0 3.90e-01 76.4% 71.7%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.62 44.0 4.51e-01 75.0% 80.0%
4163789 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.62 44.0 3.86e-01 73.6% 98.1%
164934 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.62 44.0 4.42e-01 73.6% 77.5%
4421229 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.62 44.0 3.94e-01 75.0% 69.9%
3821919 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.62 43.0 4.56e-01 73.6% 86.7%
4639331 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.61 44.0 3.71e-01 76.4% 98.4%
3258767 4.1.1.24 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.61 43.0 3.35e-01 72.2% 36.0%
4171942 4.1.1.178 beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.61 43.0 3.82e-01 73.6% 100.0%
3700010 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 45.0 3.03e-01 79.2% 41.0%
4181687 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.61 43.0 3.86e-01 75.0% 98.1%
3375181 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.61 44.0 3.52e-01 76.4% 71.7%
3651961 4.1.1.251 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.60 42.0 4.62e-01 100.0% 94.5%
5081247 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 41.0 4.48e-01 73.6% 86.7%
3273842 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.94e-01 100.0% 84.7%
3723465 4.1.1.5 beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.60 42.0 3.37e-01 72.2% 40.0%
4026161 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.60 44.0 3.71e-01 79.2% 83.2%
3300738 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.60 44.0 3.51e-01 79.2% 73.3%
3340031 4.1.1.295 beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.60 44.0 3.63e-01 79.2% 66.7%
2675860 4.1.1.15 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e 0.59 42.0 3.66e-01 75.0% 50.9%
4661207 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.59 43.0 4.01e-01 76.4% 82.2%
3699284 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.58 49.0 3.54e-01 100.0% 40.0%
3265105 11.1.1.802 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.58 50.0 4.63e-01 100.0% 77.9%
4942163 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 41.0 4.29e-01 100.0% 83.1%
3261164 11.1.1.802 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.58 50.0 4.69e-01 100.0% 80.0%
3741069 4.1.1.314 beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like 0.58 47.0 3.22e-01 90.3% 50.2%
3261366 11.1.1.802 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.57 49.0 4.57e-01 100.0% 75.8%
3302829 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.56 43.0 4.52e-01 100.0% 92.3%
3413714 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.56 45.0 3.25e-01 88.9% 59.5%
3740753 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.56 41.0 4.29e-01 79.2% 90.8%
5022745 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 49.0 4.33e-01 100.0% 91.4%
3924379 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 42.0 4.47e-01 95.8% 98.4%
3936407 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 43.0 4.07e-01 98.6% 82.2%
5082643 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 45.0 3.56e-01 100.0% 64.5%
4956300 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 4.09e-01 100.0% 82.1%
3598283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 44.0 3.68e-01 100.0% 80.8%
3296271 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 39.0 3.06e-01 88.9% 38.9%
D3 high residues 198-310
PDB