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IMGVR_UViG_3300005573_000356-3300005573-Ga0078972_10110871
Arc-VirIMGVR_UViG_3300005573_000356-3300005573-Ga0078972_10110871
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-101
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.87 | 74.0 | 5.88e-01 | 100.0% | 48.6% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.81 | 74.0 | 5.81e-01 | 100.0% | 50.0% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.74 | 59.0 | 5.51e-01 | 100.0% | 69.2% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.71 | 60.0 | 4.83e-01 | 94.7% | 48.9% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.70 | 60.0 | 6.09e-01 | 94.7% | 93.7% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.68 | 55.0 | 5.08e-01 | 100.0% | 68.9% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 56.0 | 4.82e-01 | 100.0% | 59.9% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.65 | 59.0 | 5.09e-01 | 100.0% | 83.1% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.64 | 49.0 | 4.49e-01 | 81.1% | 91.9% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.64 | 51.0 | 4.70e-01 | 93.7% | 66.4% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 39.0 | 4.21e-01 | 84.2% | 73.4% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.63 | 48.0 | 4.96e-01 | 100.0% | 86.8% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.63 | 48.0 | 4.39e-01 | 81.1% | 91.9% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 43.0 | 4.55e-01 | 88.4% | 79.1% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 40.0 | 4.01e-01 | 88.4% | 66.0% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 42.0 | 4.51e-01 | 91.6% | 84.1% |
| 1ddgA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 42.0 | 4.02e-01 | 92.6% | 61.4% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.60 | 48.0 | 4.18e-01 | 86.3% | 70.1% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.60 | 47.0 | 4.62e-01 | 100.0% | 79.8% |
| 1dj0A01 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.59 | 41.0 | 3.61e-01 | 70.5% | 61.6% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 45.0 | 4.46e-01 | 89.5% | 75.5% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 41.0 | 3.84e-01 | 96.8% | 57.4% |
| 4rzkA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 4.83e-01 | 89.5% | 92.0% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 39.0 | 3.79e-01 | 91.6% | 60.6% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 42.0 | 3.92e-01 | 86.3% | 59.8% |
| 2qtlA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 39.0 | 3.78e-01 | 90.5% | 61.7% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 4.04e-01 | 86.3% | 67.6% |
| 1r3eA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.57 | 43.0 | 3.34e-01 | 82.1% | 57.0% |
| 3mdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 41.0 | 3.92e-01 | 100.0% | 65.5% |
| 1vi7A01 | 3.30.230.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain | 0.56 | 45.0 | 4.04e-01 | 86.3% | 70.4% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.56 | 42.0 | 2.96e-01 | 100.0% | 24.2% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 41.0 | 4.17e-01 | 97.9% | 77.3% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 4.19e-01 | 85.3% | 76.5% |
| 1mruA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 42.0 | 4.25e-01 | 100.0% | 84.8% |
| 2k8qA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 3.83e-01 | 90.5% | 60.4% |
| 1xauA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.70e-01 | 86.3% | 67.3% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 48.0 | 4.11e-01 | 100.0% | 65.1% |
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.53 | 46.0 | 4.36e-01 | 93.7% | 87.4% |
| 5ixgA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.53 | 43.0 | 3.64e-01 | 89.5% | 81.0% |
| 1e62A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 44.0 | 4.04e-01 | 94.7% | 69.5% |
| 1i72A00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.52 | 43.0 | 3.07e-01 | 86.3% | 59.4% |
| 3uxfA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 46.0 | 3.85e-01 | 100.0% | 59.6% |
| 1h4uA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 46.0 | 3.44e-01 | 100.0% | 84.1% |
| 2psoB02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 45.0 | 3.69e-01 | 100.0% | 79.2% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.88 | 65.0 | 6.90e-01 | 84.2% | 85.9% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.88 | 58.0 | 6.92e-01 | 82.1% | 98.5% |
| 184471 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.87 | 74.0 | 7.74e-01 | 100.0% | 98.8% |
| 5041372 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.86 | 75.0 | 7.68e-01 | 98.9% | 95.6% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.86 | 69.0 | 7.43e-01 | 100.0% | 97.5% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.85 | 77.0 | 7.78e-01 | 100.0% | 96.8% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 78.0 | 7.53e-01 | 98.9% | 97.1% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.84 | 78.0 | 7.03e-01 | 100.0% | 94.4% |
| 3977382 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 77.0 | 7.74e-01 | 98.9% | 98.9% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.83 | 77.0 | 7.33e-01 | 100.0% | 90.0% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 77.0 | 7.50e-01 | 98.9% | 98.0% |
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 60.0 | 6.35e-01 | 94.7% | 84.7% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.81 | 69.0 | 7.24e-01 | 89.5% | 98.8% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.81 | 72.0 | 7.29e-01 | 100.0% | 95.8% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.80 | 71.0 | 7.26e-01 | 98.9% | 98.9% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 70.0 | 7.24e-01 | 98.9% | 98.9% |
| 2475124 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 75.0 | 7.58e-01 | 98.9% | 100.0% |
| 4889788 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 74.0 | 7.34e-01 | 98.9% | 97.9% |
| 3967435 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.78 | 69.0 | 6.93e-01 | 100.0% | 94.7% |
| 4995815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 73.0 | 6.57e-01 | 100.0% | 76.0% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 62.0 | 6.58e-01 | 94.7% | 95.3% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 59.0 | 5.34e-01 | 90.5% | 60.8% |
| 4954552 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.77 | 71.0 | 5.88e-01 | 100.0% | 81.9% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.77 | 70.0 | 6.93e-01 | 98.9% | 99.0% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 70.0 | 6.38e-01 | 100.0% | 95.2% |
| 3943691 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.76 | 69.0 | 6.91e-01 | 97.9% | 96.8% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.76 | 65.0 | 6.70e-01 | 100.0% | 97.8% |
| 4500974 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.76 | 59.0 | 5.43e-01 | 100.0% | 65.0% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.75 | 66.0 | 6.76e-01 | 100.0% | 96.7% |
| 3978573 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.74 | 68.0 | 6.61e-01 | 100.0% | 96.2% |
| 5079559 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 68.0 | 6.33e-01 | 100.0% | 94.8% |
| 5002662 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 61.0 | 5.98e-01 | 94.7% | 83.0% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.72 | 66.0 | 5.92e-01 | 100.0% | 90.0% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 66.0 | 6.31e-01 | 100.0% | 88.2% |
| 4033579 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.71 | 62.0 | 5.68e-01 | 96.8% | 97.6% |
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.70 | 64.0 | 5.69e-01 | 100.0% | 85.9% |
| 1914511 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.69 | 56.0 | 5.11e-01 | 100.0% | 65.4% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.69 | 58.0 | 5.26e-01 | 100.0% | 68.8% |
| 4024673 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.69 | 47.0 | 4.49e-01 | 70.5% | 99.1% |
| 5067380 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 62.0 | 5.45e-01 | 100.0% | 94.3% |
| 4638008 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.68 | 48.0 | 4.47e-01 | 73.7% | 96.7% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 61.0 | 5.51e-01 | 100.0% | 92.3% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.67 | 58.0 | 5.16e-01 | 100.0% | 66.9% |
| 3639132 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 59.0 | 4.93e-01 | 97.9% | 72.1% |
| 3970015 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.66 | 49.0 | 4.96e-01 | 100.0% | 80.9% |
| 3299946 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.65 | 52.0 | 4.84e-01 | 93.7% | 69.6% |
| 2877144 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.64 | 50.0 | 3.59e-01 | 93.7% | 27.5% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 56.0 | 5.09e-01 | 100.0% | 73.1% |
| 4960006 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.61 | 55.0 | 5.30e-01 | 100.0% | 88.1% |
| 5020520 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.60 | 46.0 | 4.71e-01 | 88.4% | 84.4% |
| 4971298 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.59 | 44.0 | 4.89e-01 | 86.3% | 98.7% |
| 4959992 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 36.0 | 3.69e-01 | 98.9% | 63.8% |
| 3663962 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.57 | 50.0 | 3.60e-01 | 100.0% | 55.2% |
| 4304256 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.57 | 43.0 | 3.24e-01 | 82.1% | 55.7% |
| 3734783 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.56 | 44.0 | 2.89e-01 | 82.1% | 52.6% |
| 4330265 | 304.107.1.3 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › TrmE_N | 0.56 | 44.0 | 4.14e-01 | 86.3% | 69.6% |
| 3525036 | 58.1.1.1 ↗ | beta barrels › Oncogene product-like › Oncogene products › Oncogene products › TCL1_MTCP1 | 0.55 | 48.0 | 4.48e-01 | 93.7% | 95.7% |
| 4069712 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.55 | 42.0 | 3.33e-01 | 82.1% | 53.0% |
| 3783819 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.55 | 44.0 | 2.92e-01 | 86.3% | 47.6% |
| 4643984 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.54 | 42.0 | 3.28e-01 | 83.2% | 60.3% |
| 3723056 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 47.0 | 3.91e-01 | 100.0% | 57.1% |
| 3928764 | 11.1.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON | 0.52 | 47.0 | 4.57e-01 | 100.0% | 93.3% |
| 4219826 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 45.0 | 3.41e-01 | 100.0% | 71.8% |
| 3243115 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.51 | 46.0 | 3.49e-01 | 100.0% | 65.3% |
| 4266150 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 45.0 | 3.34e-01 | 100.0% | 69.0% |
| 3350908 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 45.0 | 3.30e-01 | 100.0% | 67.0% |
| 5078833 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.50 | 44.0 | 3.32e-01 | 100.0% | 64.8% |
D2
high
residues 105-194
Domain cluster:
rep: IMGVR_UViG_3300005573_001597-3300005573-Ga0078972_1000005938__D114-182
D3
high
residues 245-300
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zzjA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 42.0 | 2.84e-01 | 100.0% | 16.4% |
| 1a2fA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.57 | 43.0 | 3.42e-01 | 85.7% | 38.8% |
| 5dzxA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.57 | 38.0 | 3.07e-01 | 100.0% | 35.5% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 39.0 | 3.80e-01 | 96.4% | 69.1% |
| 3d89A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.51 | 38.0 | 3.01e-01 | 85.7% | 64.0% |
| 2ivwA01 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.46e-01 | 100.0% | 60.0% |