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IMGVR_UViG_3300005607_000421-3300005607-Ga0070740_1000061040
Arc-VirIMGVR_UViG_3300005607_000421-3300005607-Ga0070740_1000061040
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-228
Domain cluster:
rep: KC821618.1__AGO48403.1__Phi10-1_gp062__00062__D33-74_121-234_364-393
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.68 | 41.0 | 4.54e-01 | 72.3% | 73.2% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 27.0 | 3.87e-01 | 98.1% | 86.4% |
| 1fouA02 | 2.40.500.10 | Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) | 0.64 | 39.0 | 4.24e-01 | 78.1% | 71.2% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 29.0 | 3.90e-01 | 100.0% | 89.5% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 25.0 | 3.66e-01 | 96.1% | 89.4% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.57 | 21.0 | 3.29e-01 | 95.5% | 95.8% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 24.0 | 3.63e-01 | 83.9% | 100.0% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 23.0 | 3.21e-01 | 96.1% | 80.3% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 24.0 | 3.37e-01 | 96.1% | 96.8% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 21.0 | 3.02e-01 | 98.7% | 88.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3949049 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.76 | 40.0 | 5.51e-01 | 97.4% | 97.6% |
| 4995901 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 25.0 | 3.99e-01 | 98.7% | 94.5% |
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 24.0 | 3.71e-01 | 95.5% | 95.0% |
| 4658938 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.58 | 27.0 | 3.43e-01 | 92.9% | 72.2% |
| 4998726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 27.0 | 3.60e-01 | 75.5% | 86.3% |
| 3483363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 23.0 | 3.14e-01 | 95.5% | 92.3% |