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IMGVR_UViG_3300005835_000012-3300005835-Ga0078910_1024307
Arc-VirIMGVR_UViG_3300005835_000012-3300005835-Ga0078910_1024307
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 52-123
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qjvA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.63 | 31.0 | 2.91e-01 | 80.6% | 34.8% |
| 5inwA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 31.0 | 2.76e-01 | 83.3% | 35.2% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 31.0 | 2.91e-01 | 84.7% | 42.1% |
| 1ft8C01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 31.0 | 3.42e-01 | 91.7% | 74.5% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.50 | 41.0 | 3.79e-01 | 93.1% | 69.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1224463 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.63 | 36.0 | 4.13e-01 | 95.8% | 81.6% |
| 4973377 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.57 | 42.0 | 3.30e-01 | 80.6% | 74.1% |
| 4634739 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.55 | 29.0 | 3.25e-01 | 73.6% | 64.0% |
| 3600429 | 6070.1.1.0 ↗ | few secondary structure elements › Sortilin C-terminal domain › Sortilin C-terminal domain › Sortilin C-terminal domain | 0.55 | 33.0 | 3.71e-01 | 93.1% | 86.0% |
| 2794605 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.55 | 30.0 | 3.53e-01 | 97.2% | 85.4% |
| 5029940 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.53 | 30.0 | 2.97e-01 | 84.7% | 47.5% |
| 4995767 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.53 | 37.0 | 2.56e-01 | 75.0% | 25.9% |
| 3684953 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.52 | 36.0 | 2.37e-01 | 73.6% | 58.4% |
| 3195155 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 32.0 | 3.32e-01 | 91.7% | 62.9% |
| 3661638 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.52 | 32.0 | 3.03e-01 | 88.9% | 46.3% |
| 3843680 | 109.3.1.168 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_5 | 0.52 | 40.0 | 2.46e-01 | 88.9% | 13.8% |
| 3281177 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.51 | 39.0 | 3.02e-01 | 87.5% | 82.2% |
| 4983135 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.50 | 34.0 | 3.27e-01 | 91.7% | 60.0% |