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IMGVR_UViG_3300005835_000054-3300005835-Ga0078910_1026212

Arc-Vir

IMGVR_UViG_3300005835_000054-3300005835-Ga0078910_1026212

Quality

49.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 400-404_408-423_425-428_430-431_433-468
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 5.09e-01 100.0% 81.2%
2uvaG09 2.40.128.700 Mainly Beta › Beta Barrel › Lipocalin › 0.60 50.0 4.26e-01 100.0% 87.9%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 49.0 3.05e-01 100.0% 89.3%
1jheA00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.55 41.0 3.40e-01 96.8% 41.9%
5o7oC01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.54 37.0 3.09e-01 77.8% 37.6%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 44.0 4.41e-01 95.2% 95.5%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.40e-01 96.8% 76.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4517901 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.79e-01 98.4% 81.1%
4930398 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 46.0 4.49e-01 95.2% 100.0%
3389662 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.55 46.0 4.36e-01 100.0% 82.5%
3270749 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.52 43.0 4.09e-01 100.0% 80.0%
D2 medium residues 1-72
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4egwA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.58 40.0 3.36e-01 77.8% 39.7%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 43.0 3.48e-01 80.6% 63.8%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 40.0 3.51e-01 73.6% 84.1%
2czrA02 3.90.79.30 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › TBP-interacting protein, C-terminal domain 0.53 40.0 3.53e-01 87.5% 93.3%
1x0cA01 2.60.350.10 Mainly Beta › Sandwich › Dex49a from penicillium minioluteum complex, domain 1 › Dextranase, N-terminal 0.52 35.0 2.76e-01 72.2% 96.5%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 40.0 3.05e-01 86.1% 86.7%
4h87A00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 34.0 2.95e-01 70.8% 94.4%
5yv7A00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.50 33.0 3.61e-01 94.4% 83.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5045780 247.1.1.12 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 0.58 42.0 3.01e-01 77.8% 32.9%
3920536 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 42.0 3.26e-01 76.4% 78.8%
3517917 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.57 36.0 3.78e-01 72.2% 72.3%
4093535 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 39.0 3.27e-01 76.4% 70.8%
3890922 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.54 37.0 3.31e-01 70.8% 78.1%