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IMGVR_UViG_3300005835_000063-3300005835-Ga0078910_1026195

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300005835_000063-3300005835-Ga0078910_1026195 ↗
Kingdom:: archaea

Quality

68.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-58

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1d8jA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.69	42.0	3.68e-01	72.7%	42.0%
3mvpA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.64	39.0	4.16e-01	72.7%	72.3%
1xf8A02	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.63	52.0	3.84e-01	96.4%	56.4%
2ga8A00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.62	44.0	2.69e-01	89.1%	12.5%
3i2fA02	1.10.3020.10	Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain)	0.60	48.0	4.06e-01	89.1%	66.3%
2ktmA00	1.10.790.10	Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain	0.58	39.0	3.67e-01	72.7%	55.9%
4y9tA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.56	46.0	3.33e-01	98.2%	67.0%
3qnmA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.56	42.0	3.68e-01	85.5%	90.0%
3vayA02	1.20.120.1600	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.55	43.0	3.72e-01	85.5%	95.4%
2xitA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.54	46.0	2.98e-01	100.0%	74.3%
1p5jA01	3.40.50.1100	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.53	46.0	3.09e-01	100.0%	45.7%
2yu1A02	1.20.58.1360	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	42.0	3.36e-01	87.3%	74.5%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3264036	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.66	46.0	3.85e-01	85.5%	40.0%
3411371	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.62	42.0	3.86e-01	70.9%	73.3%
3056252	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.61	44.0	4.60e-01	78.2%	87.8%
4010800	3355.1.1.16 ↗	alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DcuC	0.58	47.0	2.87e-01	100.0%	80.4%
165241	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.55	38.0	3.30e-01	72.7%	61.0%
3285244	5063.1.1.19 ↗	alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › DUF2277	0.54	37.0	3.99e-01	78.2%	86.7%
4568331	4070.1.1.2 ↗	alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50	0.53	47.0	3.10e-01	100.0%	85.9%
4139420	6056.1.1.2 ↗	alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N	0.53	40.0	3.72e-01	81.8%	91.4%
4410495	605.1.1.206 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Insulin	0.50	39.0	3.31e-01	83.6%	86.7%