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IMGVR_UViG_3300005835_000063-3300005835-Ga0078910_1026197
Arc-VirIMGVR_UViG_3300005835_000063-3300005835-Ga0078910_1026197
Identity
- Kingdom:
- archaea
Quality
71.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 224-282_284-292_294-304_321-330
D2
medium
residues 4-133
Domain cluster:
rep: LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00232__D12-141
D3
medium
residues 148-222
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jvgA00 | 1.10.10.1270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sbi, C3 binding domain IV | 0.72 | 34.0 | 3.48e-01 | 82.7% | 45.8% |
| 3vwbA00 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 47.0 | 4.02e-01 | 76.0% | 58.6% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 46.0 | 4.23e-01 | 77.3% | 83.5% |
| 2el7A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.61 | 50.0 | 4.67e-01 | 90.7% | 96.8% |
| 5yc9B01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.60 | 48.0 | 4.46e-01 | 88.0% | 91.8% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.54 | 44.0 | 3.96e-01 | 94.7% | 96.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.67 | 51.0 | 3.82e-01 | 81.3% | 71.9% |
| 3485716 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.65 | 50.0 | 3.74e-01 | 82.7% | 70.0% |
| 4237257 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.61 | 45.0 | 4.32e-01 | 80.0% | 100.0% |
| 4386055 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.56 | 43.0 | 2.96e-01 | 81.3% | 27.8% |
| 3715580 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.50 | 38.0 | 3.67e-01 | 85.3% | 72.9% |