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IMGVR_UViG_3300005835_000078-3300005835-Ga0078910_1023066

Arc-Vir

IMGVR_UViG_3300005835_000078-3300005835-Ga0078910_1023066

Quality

59.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-136
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09250.17 best Prim-Pol 25.0 3.20e-05 87.0% 39.9%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rniA02 3.30.2250.10 Alpha Beta › 2-Layer Sandwich › Prim-pol fold › Bifunctional DNA primase/polymerase domain 0.61 51.0 4.75e-01 100.0% 73.0%
5uzgA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 36.0 3.71e-01 72.8% 67.8%
3qkiB01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 42.0 2.91e-01 96.7% 85.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940784 862.1.1.3 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol 0.79 65.0 5.39e-01 96.7% 52.3%
3962846 7524.1.1.0 a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like 0.51 37.0 2.85e-01 79.3% 54.8%