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IMGVR_UViG_3300005835_000078-3300005835-Ga0078910_1023066
Arc-VirIMGVR_UViG_3300005835_000078-3300005835-Ga0078910_1023066
Identity
- Kingdom:
- archaea
Quality
59.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-136
Domain cluster:
rep: IMGVR_UViG_3300005835_000030-3300005835-Ga0078910_10246821__D103-163_185-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09250.17 best | Prim-Pol | 25.0 | 3.20e-05 | 87.0% | 39.9% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rniA02 | 3.30.2250.10 | Alpha Beta › 2-Layer Sandwich › Prim-pol fold › Bifunctional DNA primase/polymerase domain | 0.61 | 51.0 | 4.75e-01 | 100.0% | 73.0% |
| 5uzgA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 36.0 | 3.71e-01 | 72.8% | 67.8% |
| 3qkiB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 42.0 | 2.91e-01 | 96.7% | 85.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940784 | 862.1.1.3 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol | 0.79 | 65.0 | 5.39e-01 | 96.7% | 52.3% |
| 3962846 | 7524.1.1.0 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like | 0.51 | 37.0 | 2.85e-01 | 79.3% | 54.8% |