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IMGVR_UViG_3300005856_000091-3300005856-Ga0080005_14280036
Arc-VirIMGVR_UViG_3300005856_000091-3300005856-Ga0080005_14280036
Identity
- Kingdom:
- archaea
Quality
92.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-93
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cg2A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 48.0 | 3.45e-01 | 93.2% | 71.0% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.57 | 47.0 | 4.24e-01 | 100.0% | 64.3% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.57 | 51.0 | 5.03e-01 | 100.0% | 93.6% |
| 2f7vA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.57 | 47.0 | 3.51e-01 | 95.5% | 72.2% |
| 4ixoA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 45.0 | 4.16e-01 | 93.2% | 69.7% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.55 | 28.0 | 3.70e-01 | 78.4% | 93.5% |
| 5l8sA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 40.0 | 2.91e-01 | 77.3% | 43.2% |
| 7kx7A03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 41.0 | 3.10e-01 | 100.0% | 32.6% |
| 1ecxB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 44.0 | 4.10e-01 | 93.2% | 71.3% |
| 4fppA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 38.0 | 3.30e-01 | 73.9% | 68.6% |
| 4mo0A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.54 | 42.0 | 4.39e-01 | 100.0% | 96.2% |
| 4feuF01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 35.0 | 3.84e-01 | 96.6% | 82.2% |
| 1a0iA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.53 | 39.0 | 3.32e-01 | 77.3% | 81.8% |
| 2x5dA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 43.0 | 3.87e-01 | 94.3% | 63.3% |
| 1k3eB02 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 44.0 | 4.24e-01 | 96.6% | 97.1% |
| 6gmhK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.52 | 41.0 | 3.81e-01 | 88.6% | 66.1% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.52 | 44.0 | 3.62e-01 | 94.3% | 93.9% |
| 3imhA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 43.0 | 2.99e-01 | 94.3% | 84.9% |
| 1w7lA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 42.0 | 3.59e-01 | 93.2% | 58.7% |
| 4qnyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 38.0 | 3.47e-01 | 78.4% | 63.0% |
| 3ke3A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 3.83e-01 | 90.9% | 75.0% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 42.0 | 3.77e-01 | 95.5% | 70.7% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 36.0 | 3.14e-01 | 75.0% | 76.3% |
| 1ihjA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.50 | 35.0 | 3.43e-01 | 94.3% | 67.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5040496 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.62 | 49.0 | 5.13e-01 | 94.3% | 96.2% |
| 5028111 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.60 | 50.0 | 3.69e-01 | 95.5% | 72.2% |
| 3960425 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.58 | 48.0 | 4.22e-01 | 92.0% | 62.4% |
| 5068339 | 3016.1.1.3 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_5 | 0.58 | 48.0 | 4.77e-01 | 94.3% | 89.5% |
| 3364721 | 2484.1.1.165 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 41.0 | 3.07e-01 | 100.0% | 30.2% |
| 3596068 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.57 | 49.0 | 4.88e-01 | 100.0% | 93.3% |
| 4096822 | 3016.1.1.3 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_5 | 0.57 | 48.0 | 4.53e-01 | 94.3% | 77.1% |
| 5579 | 306.8.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like › Peptidase_Prp | 0.57 | 51.0 | 5.03e-01 | 100.0% | 93.6% |
| 3177415 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.57 | 44.0 | 4.15e-01 | 100.0% | 68.2% |
| 3962011 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.56 | 39.0 | 3.38e-01 | 100.0% | 45.7% |
| 4929591 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.56 | 43.0 | 4.38e-01 | 98.9% | 83.1% |
| 5042979 | 241.1.1.30 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 | 0.56 | 46.0 | 3.91e-01 | 92.0% | 79.3% |
| 2531310 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.56 | 48.0 | 4.42e-01 | 100.0% | 72.9% |
| 3712812 | 301.8.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase | 0.54 | 39.0 | 3.76e-01 | 75.0% | 99.0% |
| 1152520 | 3016.1.1.3 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_5 | 0.54 | 45.0 | 4.24e-01 | 96.6% | 79.3% |
| 3508171 | 3392.1.1.1 ↗ | a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › PAP_PilO | 0.54 | 40.0 | 3.32e-01 | 100.0% | 43.0% |
| 1152522 | 3016.1.1.3 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_5 | 0.53 | 43.0 | 4.15e-01 | 93.2% | 80.2% |
| 4930685 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.53 | 39.0 | 3.22e-01 | 77.3% | 65.0% |
| 4286724 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.53 | 44.0 | 3.21e-01 | 95.5% | 52.0% |
| 5076110 | 304.136.1.1 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SBP_bac_5 | 0.53 | 44.0 | 3.63e-01 | 89.8% | 54.8% |
| 3308868 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 43.0 | 4.10e-01 | 94.3% | 98.1% |
| 3305653 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.51 | 34.0 | 3.72e-01 | 73.9% | 85.7% |
| 3272573 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.51 | 33.0 | 3.52e-01 | 93.2% | 76.0% |
| 3719440 | 305.1.1.2 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 | 0.51 | 40.0 | 3.61e-01 | 89.8% | 61.6% |
| 3987333 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.51 | 41.0 | 2.85e-01 | 93.2% | 84.3% |
| 3292735 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.51 | 36.0 | 3.14e-01 | 73.9% | 89.6% |
| 4399355 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.50 | 36.0 | 3.24e-01 | 75.0% | 88.8% |
| 3445028 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.50 | 31.0 | 3.24e-01 | 88.6% | 67.5% |
| 4808037 | 3838.1.1.3 ↗ | alpha arrays › SidM Rab1-activation domain › SidM Rab1-activation domain › SidM Rab1-activation domain › SidM_N | 0.50 | 43.0 | 3.84e-01 | 95.5% | 93.0% |