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IMGVR_UViG_3300005859_000130-3300005859-Ga0080003_100218612
Arc-VirIMGVR_UViG_3300005859_000130-3300005859-Ga0080003_100218612
Identity
- Kingdom:
- archaea
Quality
92.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-65
Domain cluster:
rep: IMGVR_UViG_3300026885_000047-3300026885-Ga0208662_10142110__D6-64
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05496.19 best | RuvB_N | 27.6 | 3.10e-06 | 89.2% | 29.6% |
D2
medium
residues 66-152
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r44A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 65.0 | 5.19e-01 | 100.0% | 44.9% |
| 1r6bX04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 61.0 | 4.56e-01 | 100.0% | 40.6% |
| 4zpxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 59.0 | 4.25e-01 | 100.0% | 35.2% |
| 1g8pA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 56.0 | 4.27e-01 | 100.0% | 40.7% |
| 2p0oA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 40.0 | 3.00e-01 | 87.4% | 23.5% |
| 4r7zA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 46.0 | 3.10e-01 | 100.0% | 23.4% |
| 1jb0C00 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 32.0 | 3.39e-01 | 86.2% | 62.5% |
| 3d03A01 | 3.60.21.40 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain | 0.54 | 39.0 | 3.49e-01 | 87.4% | 51.9% |
| 2zjrG00 | 3.90.1180.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 | 0.54 | 43.0 | 3.67e-01 | 87.4% | 73.2% |
| 2vepA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 39.0 | 2.89e-01 | 86.2% | 28.7% |
| 4g6zA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 47.0 | 3.25e-01 | 100.0% | 89.0% |
| 8b4hA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 39.0 | 3.27e-01 | 83.9% | 58.0% |
| 4xpkA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 33.0 | 2.88e-01 | 83.9% | 40.4% |
| 2uv8A04 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 41.0 | 2.54e-01 | 88.5% | 17.3% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051791 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.85 | 74.0 | 5.65e-01 | 100.0% | 43.8% |
| 3507995 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.84 | 72.0 | 5.26e-01 | 100.0% | 36.7% |
| 3398771 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.84 | 71.0 | 5.01e-01 | 100.0% | 31.8% |
| 5018184 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.84 | 72.0 | 5.48e-01 | 100.0% | 42.1% |
| 3890507 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.84 | 71.0 | 5.10e-01 | 100.0% | 34.3% |
| 3212281 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.84 | 71.0 | 4.68e-01 | 100.0% | 24.3% |
| 3560835 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.83 | 71.0 | 4.63e-01 | 100.0% | 23.2% |
| 3607805 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.82 | 69.0 | 4.76e-01 | 100.0% | 28.9% |
| 4324606 | 2004.1.1.155 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 | 0.81 | 69.0 | 4.96e-01 | 100.0% | 34.3% |
| 1614408 | 2004.1.1.155 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 | 0.81 | 65.0 | 4.76e-01 | 100.0% | 33.9% |
| 3944790 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.81 | 71.0 | 5.42e-01 | 100.0% | 44.3% |
| 3999160 | 2004.1.1.542 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5, AAA_7 | 0.80 | 67.0 | 4.03e-01 | 100.0% | 13.6% |
| 5012900 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.79 | 66.0 | 4.73e-01 | 100.0% | 32.5% |
| 4928781 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.78 | 71.0 | 4.60e-01 | 100.0% | 30.5% |
| 4003228 | 2004.1.1.542 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5, AAA_7 | 0.78 | 72.0 | 4.99e-01 | 100.0% | 41.1% |
| 3957998 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.78 | 72.0 | 5.34e-01 | 100.0% | 50.2% |
| 4974815 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 66.0 | 5.05e-01 | 100.0% | 42.1% |
| 4314819 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.76 | 55.0 | 4.21e-01 | 100.0% | 33.8% |
| 5050668 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.76 | 69.0 | 5.35e-01 | 100.0% | 52.4% |
| 3594982 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.75 | 63.0 | 4.41e-01 | 100.0% | 30.0% |
| 3290062 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 67.0 | 4.65e-01 | 100.0% | 35.2% |
| 4318504 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.75 | 67.0 | 5.32e-01 | 100.0% | 50.0% |
| 3611910 | 2004.1.1.418 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase | 0.75 | 63.0 | 4.32e-01 | 100.0% | 28.4% |
| 3961108 | 2004.1.1.155 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_3 | 0.75 | 57.0 | 4.99e-01 | 97.7% | 54.6% |
| 3594046 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 63.0 | 4.47e-01 | 100.0% | 30.8% |
| 3839782 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.74 | 59.0 | 4.12e-01 | 100.0% | 28.1% |
| 3703312 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 62.0 | 3.95e-01 | 100.0% | 19.7% |
| 3972249 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 59.0 | 4.50e-01 | 100.0% | 38.9% |
| 4030223 | 2004.1.1.418 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase | 0.73 | 63.0 | 4.40e-01 | 100.0% | 30.0% |
| 5025359 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.73 | 63.0 | 4.37e-01 | 100.0% | 29.5% |
| 4958529 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.73 | 67.0 | 5.16e-01 | 100.0% | 48.6% |
| None | — | 0.73 | 57.0 | 4.56e-01 | 100.0% | 44.4% | |
| 3255516 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.73 | 63.0 | 4.30e-01 | 100.0% | 28.1% |
| 3481498 | 2004.1.1.418 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase | 0.73 | 62.0 | 4.25e-01 | 100.0% | 27.7% |
| 5003899 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.73 | 62.0 | 4.28e-01 | 100.0% | 28.2% |
| None | — | 0.73 | 57.0 | 4.45e-01 | 100.0% | 41.8% | |
| 5059517 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.73 | 65.0 | 4.87e-01 | 100.0% | 46.8% |
| None | — | 0.73 | 56.0 | 4.43e-01 | 100.0% | 41.8% | |
| 4069782 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 56.0 | 3.89e-01 | 100.0% | 26.8% |
| 4078827 | 2004.1.1.418 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase | 0.72 | 61.0 | 4.17e-01 | 100.0% | 26.7% |
| 3677397 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 61.0 | 3.74e-01 | 100.0% | 15.9% |
| None | — | 0.71 | 61.0 | 3.89e-01 | 100.0% | 19.5% | |
| 3465917 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 61.0 | 3.77e-01 | 100.0% | 16.7% |
| 4007069 | 2004.1.1.624 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase, AAA_5 | 0.71 | 63.0 | 4.82e-01 | 100.0% | 47.8% |
| 3550992 | 2004.1.1.418 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase | 0.71 | 60.0 | 4.24e-01 | 100.0% | 30.2% |
| None | — | 0.71 | 60.0 | 3.97e-01 | 100.0% | 22.9% | |
| 4017535 | 2004.1.1.418 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase | 0.71 | 60.0 | 4.08e-01 | 100.0% | 25.4% |
| 3695173 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.71 | 60.0 | 4.13e-01 | 100.0% | 27.0% |
| 3197159 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 61.0 | 3.86e-01 | 100.0% | 19.1% |
| 5009803 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.70 | 63.0 | 4.59e-01 | 100.0% | 45.8% |
| 5034518 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.70 | 54.0 | 4.00e-01 | 100.0% | 33.0% |
| 4974760 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 61.0 | 4.78e-01 | 100.0% | 47.7% |
| None | — | 0.69 | 59.0 | 3.79e-01 | 100.0% | 20.8% | |
| 4031073 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 60.0 | 4.81e-01 | 100.0% | 52.8% |
| 4195107 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.68 | 58.0 | 4.06e-01 | 100.0% | 29.5% |
| 4969622 | 2004.1.1.245 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_PrkA | 0.67 | 62.0 | 4.27e-01 | 100.0% | 54.9% |
| 4944898 | 2004.1.1.1210 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_lid_2 | 0.67 | 57.0 | 4.04e-01 | 100.0% | 31.8% |
| 4927696 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.66 | 60.0 | 3.92e-01 | 100.0% | 24.1% |
| 4580526 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.65 | 56.0 | 3.91e-01 | 100.0% | 30.6% |
| 4206355 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.65 | 37.0 | 2.75e-01 | 86.2% | 20.9% |
| 3830853 | 2004.1.1.675 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2, NBD_SMAX1 | 0.64 | 53.0 | 3.21e-01 | 100.0% | 14.3% |
| 1788857 | 2004.1.1.444 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_PrkA | 0.63 | 56.0 | 4.05e-01 | 100.0% | 34.8% |
| 4934143 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 54.0 | 3.86e-01 | 100.0% | 66.5% |
| 5083835 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.57 | 45.0 | 3.08e-01 | 87.4% | 29.7% |
| 3187410 | 2006.1.1.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF | 0.53 | 38.0 | 2.89e-01 | 87.4% | 30.0% |
| None | — | 0.53 | 40.0 | 2.94e-01 | 86.2% | 29.0% | |
| 3705492 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 41.0 | 3.02e-01 | 86.2% | 38.4% |
| 4388636 | 2002.1.1.43 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth | 0.52 | 39.0 | 2.89e-01 | 87.4% | 29.6% |