IMGVR_UViG_3300005860_000312-3300005860-Ga0080004_114529617

Arc-Vir

Identity

70.2 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-37_59-146

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5dcaA11	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.60	49.0	4.96e-01	100.0%	91.4%
1aepA00	1.20.120.20	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein	0.56	39.0	3.42e-01	71.4%	84.3%
1pu6A01	1.10.1670.10	Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal)	0.55	37.0	3.89e-01	85.7%	76.6%
4m70B00	1.10.246.200	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain	0.52	35.0	3.70e-01	91.4%	76.9%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3652381	101.1.2.392 ↗	alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH	0.58	50.0	4.87e-01	99.0%	88.7%
None	—		0.57	49.0	4.95e-01	99.0%	96.2%
4059363	142.3.1.1 ↗	alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Sld7_C	0.55	33.0	3.58e-01	76.2%	70.0%
3930712	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.51	39.0	4.05e-01	100.0%	91.6%
3232380	5069.1.1.7 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561	0.51	39.0	3.27e-01	81.9%	78.4%