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IMGVR_UViG_3300005861_000045-3300005861-Ga0080006_114347115
Arc-VirIMGVR_UViG_3300005861_000045-3300005861-Ga0080006_114347115
Identity
- Kingdom:
- archaea
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-93
Domain cluster:
rep: NC_030884__YP_009272992.1__BHS13-gp40__00040__D27-92
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.72 | 54.0 | 4.09e-01 | 79.2% | 71.8% |
| 5bp3B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.70 | 48.0 | 3.23e-01 | 71.4% | 38.3% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.66 | 45.0 | 3.17e-01 | 70.1% | 94.7% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 46.0 | 3.81e-01 | 74.0% | 56.7% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.65 | 51.0 | 3.70e-01 | 83.1% | 95.1% |
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.65 | 50.0 | 4.72e-01 | 83.1% | 91.5% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 48.0 | 3.81e-01 | 77.9% | 58.2% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.65 | 49.0 | 3.01e-01 | 80.5% | 35.9% |
| 8gzhC01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.64 | 50.0 | 3.82e-01 | 84.4% | 93.4% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.64 | 49.0 | 4.02e-01 | 81.8% | 95.8% |
| 3kg6C00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.64 | 48.0 | 3.34e-01 | 81.8% | 47.3% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.64 | 48.0 | 3.29e-01 | 83.1% | 48.7% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.63 | 51.0 | 4.70e-01 | 85.7% | 80.4% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.63 | 48.0 | 3.73e-01 | 84.4% | 75.6% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.62 | 46.0 | 3.13e-01 | 80.5% | 80.6% |
| 1nycA00 | 2.40.310.10 | Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors | 0.62 | 47.0 | 4.17e-01 | 81.8% | 66.7% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 46.0 | 4.17e-01 | 81.8% | 90.7% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.60 | 43.0 | 3.40e-01 | 77.9% | 88.1% |
| 3zxjA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 44.0 | 3.04e-01 | 83.1% | 81.1% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.59 | 46.0 | 3.63e-01 | 87.0% | 89.2% |
| 4mveA00 | 2.40.128.580 | Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain | 0.59 | 45.0 | 3.77e-01 | 85.7% | 88.4% |
| 4hwmA00 | 2.40.128.500 | Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein | 0.59 | 46.0 | 4.01e-01 | 84.4% | 73.5% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.59 | 45.0 | 3.88e-01 | 81.8% | 83.3% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.58 | 48.0 | 3.18e-01 | 92.2% | 97.2% |
| 2b4wA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 42.0 | 2.88e-01 | 77.9% | 74.6% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 43.0 | 3.39e-01 | 80.5% | 87.0% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 42.0 | 3.67e-01 | 79.2% | 80.2% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 42.0 | 3.55e-01 | 81.8% | 76.6% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 39.0 | 3.34e-01 | 74.0% | 96.9% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 43.0 | 3.04e-01 | 85.7% | 92.7% |
| 3ltiA01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.56 | 43.0 | 3.37e-01 | 83.1% | 98.8% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 40.0 | 3.48e-01 | 77.9% | 100.0% |
| 5jozA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 42.0 | 2.80e-01 | 83.1% | 76.7% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 43.0 | 3.16e-01 | 88.3% | 56.2% |
| 3qvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 38.0 | 3.52e-01 | 75.3% | 97.0% |
| 4aq1A02 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 4.00e-01 | 84.4% | 96.7% |
| 3q48A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.02e-01 | 81.8% | 96.4% |
| 3ap9A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 3.47e-01 | 88.3% | 89.4% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 42.0 | 3.32e-01 | 90.9% | 83.1% |
| 2xg5A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.96e-01 | 85.7% | 92.4% |
| 6cxhA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.52 | 42.0 | 3.50e-01 | 88.3% | 97.8% |
| 3bp1A02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.52 | 37.0 | 3.17e-01 | 76.6% | 94.7% |
| 3n40P02 | 2.60.40.3200 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain | 0.51 | 42.0 | 3.08e-01 | 92.2% | 63.1% |
| 4ftxB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 44.0 | 3.81e-01 | 100.0% | 75.8% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.50 | 40.0 | 3.78e-01 | 87.0% | 86.2% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 32.0 | 3.43e-01 | 89.6% | 75.8% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2740077 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.72 | 52.0 | 4.87e-01 | 76.6% | 96.9% |
| 3212698 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.72 | 54.0 | 4.12e-01 | 80.5% | 60.0% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.71 | 48.0 | 4.63e-01 | 70.1% | 98.9% |
| 3418904 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.69 | 49.0 | 4.57e-01 | 76.6% | 96.0% |
| 3554206 | 5.1.4.427 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Med16_N | 0.68 | 48.0 | 2.95e-01 | 74.0% | 78.4% |
| 3812869 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.68 | 49.0 | 4.55e-01 | 76.6% | 96.0% |
| 1097232 | 3180.1.1.1 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG | 0.68 | 55.0 | 4.92e-01 | 88.3% | 86.9% |
| 4021761 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 51.0 | 3.08e-01 | 80.5% | 83.8% |
| 3742051 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 48.0 | 3.15e-01 | 75.3% | 46.2% |
| 3996732 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.67 | 49.0 | 3.26e-01 | 76.6% | 21.4% |
| 3264341 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.67 | 47.0 | 3.12e-01 | 74.0% | 61.2% |
| 200662 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.67 | 52.0 | 3.77e-01 | 83.1% | 95.2% |
| 3698019 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.66 | 46.0 | 3.76e-01 | 72.7% | 64.8% |
| 4012616 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.66 | 48.0 | 4.23e-01 | 77.9% | 88.7% |
| 3210163 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.65 | 49.0 | 3.05e-01 | 80.5% | 84.1% |
| 3170091 | 243.1.1.116 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29059 | 0.65 | 46.0 | 4.15e-01 | 75.3% | 76.4% |
| 3940470 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.64 | 46.0 | 2.95e-01 | 75.3% | 65.3% |
| 3427945 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.64 | 46.0 | 4.26e-01 | 76.6% | 99.0% |
| 3575357 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 45.0 | 2.97e-01 | 75.3% | 57.9% |
| 3622284 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.63 | 49.0 | 3.01e-01 | 83.1% | 63.8% |
| 4196888 | 5.1.4.327 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd | 0.63 | 47.0 | 2.96e-01 | 79.2% | 78.9% |
| 3960946 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.63 | 45.0 | 3.63e-01 | 76.6% | 89.0% |
| 4003932 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.62 | 45.0 | 3.86e-01 | 75.3% | 75.8% |
| 3410461 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 45.0 | 2.99e-01 | 77.9% | 87.0% |
| 3585414 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.62 | 44.0 | 3.95e-01 | 75.3% | 67.3% |
| 2521119 | 5084.1.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › MSP | 0.62 | 48.0 | 3.42e-01 | 84.4% | 83.3% |
| 3686499 | 298.1.1.25 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › ox_reductase_C | 0.60 | 48.0 | 3.39e-01 | 89.6% | 87.2% |
| 3990141 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 44.0 | 2.95e-01 | 80.5% | 82.7% |
| 3925946 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 43.0 | 2.77e-01 | 76.6% | 65.7% |
| 3706310 | 331.19.1.0 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains | 0.59 | 44.0 | 4.01e-01 | 79.2% | 95.2% |
| 3721965 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.59 | 43.0 | 3.83e-01 | 77.9% | 86.1% |
| 3572103 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.59 | 48.0 | 3.97e-01 | 88.3% | 85.2% |
| 5006258 | 205.1.1.128 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › APS-reductase_C | 0.59 | 42.0 | 3.42e-01 | 75.3% | 42.1% |
| 4003315 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.58 | 44.0 | 2.93e-01 | 84.4% | 98.6% |
| 1726557 | 5084.1.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › MSP | 0.58 | 45.0 | 3.31e-01 | 88.3% | 76.7% |
| 4212114 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.58 | 45.0 | 3.52e-01 | 85.7% | 94.3% |
| 4014123 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.58 | 45.0 | 3.04e-01 | 94.8% | 22.0% |
| 5059896 | 11.1.4.139 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PKD_4 | 0.57 | 41.0 | 3.10e-01 | 75.3% | 86.8% |
| 3999383 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 41.0 | 2.77e-01 | 76.6% | 78.8% |
| 5039633 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 42.0 | 4.34e-01 | 79.2% | 86.5% |
| 3361063 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.56 | 44.0 | 3.08e-01 | 87.0% | 90.4% |
| 4994580 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.56 | 41.0 | 2.55e-01 | 77.9% | 13.9% |
| 3389939 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.55 | 45.0 | 3.46e-01 | 90.9% | 60.6% |
| 3492308 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.55 | 42.0 | 2.76e-01 | 87.0% | 94.1% |
| 3900706 | 11.1.4.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR_TEN1-4 | 0.54 | 37.0 | 3.42e-01 | 72.7% | 85.5% |
| 3590900 | 3370.1.1.1 ↗ | beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 › Lactococcin_972 | 0.54 | 42.0 | 3.95e-01 | 83.1% | 89.4% |
| 3411213 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 44.0 | 3.63e-01 | 89.6% | 85.0% |
| 3958695 | 3484.1.1.2 ↗ | a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 | 0.54 | 42.0 | 3.37e-01 | 85.7% | 55.6% |
| 169992 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.54 | 43.0 | 3.16e-01 | 88.3% | 56.2% |
| 3553623 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.54 | 45.0 | 3.86e-01 | 93.5% | 72.8% |
| 4948929 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.53 | 39.0 | 3.77e-01 | 79.2% | 84.4% |
| 3968513 | 10.1.1.27 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 | 0.53 | 41.0 | 3.03e-01 | 87.0% | 73.0% |
| 3231481 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 42.0 | 3.11e-01 | 89.6% | 78.1% |
| 2771836 | 5084.1.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › MSP | 0.51 | 36.0 | 3.01e-01 | 75.3% | 68.8% |
| 3974795 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.87e-01 | 84.4% | 98.8% |
| 4991675 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.51 | 39.0 | 3.41e-01 | 84.4% | 99.2% |
| 4955091 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.51 | 42.0 | 3.06e-01 | 96.1% | 45.8% |
D2
high
residues 95-143
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.62 | 44.0 | 3.48e-01 | 77.6% | 41.3% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 41.0 | 3.01e-01 | 71.4% | 58.1% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 41.0 | 3.93e-01 | 89.8% | 62.1% |
| 4gkpB00 | 3.40.850.20 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › | 0.59 | 51.0 | 3.25e-01 | 100.0% | 85.8% |
| 2wfbA00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.56 | 44.0 | 3.56e-01 | 100.0% | 54.2% |
| 1szqA01 | 1.10.4100.10 | Mainly Alpha › Orthogonal Bundle › 2-methylcitrate dehydratase PrpD › 2-methylcitrate dehydratase PrpD | 0.55 | 45.0 | 2.82e-01 | 100.0% | 58.3% |
| 2o0aA00 | 3.40.850.20 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › | 0.55 | 46.0 | 2.94e-01 | 100.0% | 82.2% |
| 4idhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 2.67e-01 | 85.7% | 89.4% |
| 1kolA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.52 | 40.0 | 2.78e-01 | 100.0% | 57.2% |
| 1ej6A04 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 43.0 | 2.81e-01 | 93.9% | 36.1% |
| 5a2fA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.02e-01 | 81.6% | 64.2% |
| 2jubA01 | 3.30.160.860 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 34.0 | 3.69e-01 | 91.8% | 94.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932734 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.65 | 50.0 | 3.76e-01 | 85.7% | 89.6% |
| 3682061 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 40.0 | 4.43e-01 | 93.9% | 100.0% |
| 3241917 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 48.0 | 3.00e-01 | 83.7% | 17.6% |
| 3499778 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 38.0 | 3.75e-01 | 100.0% | 57.4% |
| 3678316 | 605.6.1.10 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like › PF26664 | 0.61 | 41.0 | 3.49e-01 | 100.0% | 38.9% |
| 3445108 | 386.1.1.207 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 | 0.60 | 41.0 | 3.99e-01 | 100.0% | 63.6% |
| 3765582 | 386.1.1.289 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30903 | 0.60 | 37.0 | 3.23e-01 | 100.0% | 36.3% |
| 3464575 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 40.0 | 3.33e-01 | 100.0% | 36.0% |
| 3515928 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 38.0 | 3.80e-01 | 100.0% | 65.3% |
| 3584741 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 40.0 | 4.16e-01 | 100.0% | 82.2% |
| 3992839 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 42.0 | 4.33e-01 | 100.0% | 86.7% |
| 3238170 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 39.0 | 3.84e-01 | 98.0% | 63.6% |
| 3709449 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 49.0 | 3.05e-01 | 100.0% | 19.7% |
| 3692529 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 39.0 | 4.19e-01 | 100.0% | 90.0% |
| 4146058 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 36.0 | 2.68e-01 | 95.9% | 22.1% |
| 3406467 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 38.0 | 3.91e-01 | 100.0% | 80.0% |
| 3579437 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 37.0 | 3.46e-01 | 100.0% | 50.0% |
| 3304945 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.55 | 41.0 | 3.81e-01 | 89.8% | 60.0% |
| 3936595 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 39.0 | 3.71e-01 | 100.0% | 63.3% |
| 3621229 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.55 | 36.0 | 3.39e-01 | 100.0% | 48.6% |
| 3767237 | 101.1.1.386 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › zf-C2H2_4 | 0.55 | 37.0 | 2.99e-01 | 100.0% | 33.3% |
| 3451730 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 42.0 | 3.88e-01 | 91.8% | 65.7% |
| 3296910 | 386.1.1.207 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 | 0.54 | 38.0 | 3.98e-01 | 100.0% | 95.0% |
| 3176264 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.54 | 39.0 | 3.97e-01 | 100.0% | 82.0% |
| 3198744 | 2485.1.1.78 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Suc_Fer-like | 0.54 | 41.0 | 3.37e-01 | 87.8% | 73.0% |
| 4223286 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.54 | 36.0 | 2.53e-01 | 93.9% | 18.4% |
| 3267918 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 38.0 | 3.70e-01 | 89.8% | 69.1% |
| 3639147 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.54 | 41.0 | 2.50e-01 | 100.0% | 13.4% |
| 3922099 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 39.0 | 3.84e-01 | 100.0% | 74.5% |
| 3882068 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.52 | 35.0 | 3.57e-01 | 100.0% | 72.0% |
| 3844188 | 386.1.1.289 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30903 | 0.52 | 34.0 | 3.29e-01 | 100.0% | 56.7% |
| 3479347 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 34.0 | 3.41e-01 | 100.0% | 66.0% |
| 4990476 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.51 | 36.0 | 3.17e-01 | 95.9% | 45.9% |
| 3579412 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 40.0 | 3.70e-01 | 100.0% | 67.7% |
| 3931217 | 502.1.1.0 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain | 0.51 | 34.0 | 3.24e-01 | 100.0% | 53.8% |
| 5045830 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.51 | 38.0 | 3.45e-01 | 81.6% | 90.0% |
| 4410082 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 40.0 | 4.05e-01 | 100.0% | 93.9% |
| 3925231 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 34.0 | 3.28e-01 | 100.0% | 58.3% |
| 3913579 | 386.1.1.279 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF27065 | 0.51 | 41.0 | 4.00e-01 | 100.0% | 85.5% |
| 3497811 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.51 | 38.0 | 2.75e-01 | 85.7% | 64.8% |
| 4032235 | 3264.1.1.0 ↗ | 0.51 | 44.0 | 3.05e-01 | 100.0% | 47.1% | |
| 3483671 | 386.1.1.64 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_12 | 0.51 | 41.0 | 3.74e-01 | 95.9% | 90.0% |