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IMGVR_UViG_3300005964_000014-3300005964-Ga0081529_12815427
Arc-VirIMGVR_UViG_3300005964_000014-3300005964-Ga0081529_12815427
Identity
- Kingdom:
- archaea
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-98
Domain cluster:
rep: MK064566__AZI75968.1__SBV1-gp19__00019__D34-114
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.60 | 43.0 | 3.98e-01 | 76.6% | 88.7% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 43.0 | 3.98e-01 | 78.7% | 86.8% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 47.0 | 4.45e-01 | 88.3% | 74.6% |
| 4jbmB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 44.0 | 4.46e-01 | 83.0% | 82.3% |
| 1tltA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 35.0 | 2.83e-01 | 100.0% | 30.6% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 33.0 | 3.66e-01 | 81.9% | 72.0% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.56 | 31.0 | 3.30e-01 | 100.0% | 58.8% |
| 3vpbB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 43.0 | 4.10e-01 | 84.0% | 69.6% |
| 3u1wA02 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 31.0 | 3.63e-01 | 83.0% | 77.3% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 42.0 | 3.98e-01 | 80.9% | 87.6% |
| 1fguB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 43.0 | 4.18e-01 | 86.2% | 91.4% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 4.12e-01 | 85.1% | 76.7% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 41.0 | 3.10e-01 | 83.0% | 42.4% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.53 | 37.0 | 3.79e-01 | 77.7% | 74.4% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 42.0 | 4.22e-01 | 89.4% | 85.6% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 42.0 | 4.09e-01 | 85.1% | 80.4% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 43.0 | 4.27e-01 | 90.4% | 94.0% |
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.53 | 46.0 | 4.21e-01 | 100.0% | 82.8% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 40.0 | 2.99e-01 | 81.9% | 40.8% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.52 | 33.0 | 3.00e-01 | 100.0% | 46.2% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 37.0 | 3.48e-01 | 76.6% | 95.0% |
| 3hi2B00 | 3.30.2310.40 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › | 0.51 | 38.0 | 3.85e-01 | 85.1% | 77.3% |
| 1gm5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 40.0 | 3.94e-01 | 85.1% | 79.4% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.51 | 43.0 | 3.72e-01 | 93.6% | 62.1% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.51 | 28.0 | 2.81e-01 | 86.2% | 49.5% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.51 | 35.0 | 3.15e-01 | 70.2% | 94.7% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.51 | 37.0 | 3.37e-01 | 78.7% | 85.3% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.50 | 29.0 | 2.84e-01 | 74.5% | 48.6% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5021275 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 56.0 | 5.36e-01 | 88.3% | 98.2% |
| 5002173 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 55.0 | 5.61e-01 | 88.3% | 95.6% |
| 3505867 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.68 | 49.0 | 5.38e-01 | 87.2% | 96.0% |
| 4935901 | 2.1.1.382 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28814 | 0.68 | 54.0 | 5.60e-01 | 88.3% | 92.1% |
| 3907293 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.62 | 45.0 | 4.37e-01 | 76.6% | 95.2% |
| 5004470 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.61 | 43.0 | 3.82e-01 | 74.5% | 92.1% |
| 3838288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 47.0 | 4.42e-01 | 84.0% | 68.7% |
| 3714703 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.59 | 43.0 | 4.21e-01 | 74.5% | 100.0% |
| 3624619 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 43.0 | 3.95e-01 | 78.7% | 81.5% |
| 4128954 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.58 | 41.0 | 4.67e-01 | 80.9% | 98.6% |
| 3473908 | 220.1.1.157 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29715 | 0.58 | 44.0 | 3.70e-01 | 81.9% | 62.4% |
| 3496244 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 43.0 | 3.85e-01 | 80.9% | 80.7% |
| 4030120 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 48.0 | 3.07e-01 | 93.6% | 32.0% |
| 3241305 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.58 | 41.0 | 3.62e-01 | 74.5% | 59.3% |
| 4052975 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.57 | 45.0 | 4.27e-01 | 84.0% | 71.8% |
| 5033640 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.57 | 44.0 | 4.27e-01 | 84.0% | 80.9% |
| 3271234 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 28.0 | 3.72e-01 | 77.7% | 95.6% |
| 1140900 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.57 | 31.0 | 3.88e-01 | 83.0% | 86.4% |
| 4298544 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 44.0 | 4.04e-01 | 85.1% | 64.8% |
| 3963927 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.56 | 44.0 | 4.20e-01 | 85.1% | 80.0% |
| 3574976 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.56 | 28.0 | 3.47e-01 | 98.9% | 80.0% |
| 3742215 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.55 | 42.0 | 4.33e-01 | 83.0% | 91.1% |
| 3334359 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.55 | 40.0 | 3.30e-01 | 77.7% | 90.0% |
| 4964974 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 44.0 | 4.26e-01 | 88.3% | 79.0% |
| 4087511 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.54 | 41.0 | 3.99e-01 | 85.1% | 73.6% |
| 2794152 | 2.2.1.0 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins | 0.53 | 41.0 | 3.79e-01 | 84.0% | 83.1% |
| 3590786 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.53 | 41.0 | 3.97e-01 | 85.1% | 74.5% |
| 5013360 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.53 | 35.0 | 3.52e-01 | 79.8% | 66.3% |
| 4932452 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 40.0 | 3.99e-01 | 80.9% | 94.7% |
| 4145173 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.53 | 41.0 | 4.00e-01 | 85.1% | 77.1% |
| 5061446 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 40.0 | 3.66e-01 | 85.1% | 88.9% |
| 5008603 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.52 | 38.0 | 3.01e-01 | 76.6% | 55.8% |
| 3965976 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.50 | 36.0 | 3.69e-01 | 76.6% | 98.9% |