IMGVR_UViG_3300005964_000058-3300005964-Ga0081529_1177039

Arc-Vir

Identity

63.7 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 400-453

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1i39A02	1.10.10.460	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribonuclease hii. Domain 2	0.69	44.0	4.70e-01	72.2%	77.8%
1qb2A00	1.10.260.30	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain	0.66	44.0	3.54e-01	77.8%	34.9%
1te4A01	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.63	47.0	4.08e-01	83.3%	85.4%
3p5pA03	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.61	49.0	3.15e-01	94.4%	57.7%
3vhrA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.55	40.0	2.79e-01	85.2%	38.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4171632	5054.1.1.7 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA	0.69	49.0	3.14e-01	75.9%	56.2%
3684835	3712.1.1.1 ↗	a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11	0.65	48.0	3.99e-01	79.6%	72.6%
3789336	109.3.1.175 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › LHD_TRPY1	0.62	50.0	3.51e-01	96.3%	53.0%

D2 medium residues 549-608

PDB

D3 medium residues 667-766

PDB

Domain cluster: rep: IMGVR_UViG_3300005856_000098-3300005856-Ga0080005_1295621__D107-208