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IMGVR_UViG_3300005977_000003-3300005977-Ga0081474_11704773

Arc-Vir

IMGVR_UViG_3300005977_000003-3300005977-Ga0081474_11704773

Identity

Kingdom:
archaea

Quality

71.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-103
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.69 38.0 3.23e-01 92.5% 34.0%
1pqzA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.64 37.0 3.21e-01 91.4% 38.0%
4bwsF00 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.60 38.0 4.30e-01 90.3% 89.6%
2pw9C02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 35.0 4.07e-01 72.0% 94.8%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.56 45.0 4.80e-01 96.8% 100.0%
6ovnB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.61e-01 73.1% 70.9%
2dbuB00 3.60.20.40 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit 0.54 40.0 3.29e-01 80.6% 55.3%
5swsE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.56e-01 73.1% 71.2%
1flcB00 3.90.20.10 Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › 0.53 30.0 2.50e-01 100.0% 31.5%
1cczA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.62e-01 77.4% 69.9%
3n2qA02 3.30.300.190 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.52 39.0 3.63e-01 78.5% 69.0%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.52 38.0 3.91e-01 78.5% 87.0%
3l9rA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.52 42.0 3.47e-01 89.2% 83.4%
2o5nA02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.52 40.0 3.35e-01 81.7% 80.9%
4bthA00 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.50 38.0 3.14e-01 79.6% 50.6%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4934918 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.73 36.0 4.15e-01 95.7% 62.9%
3586250 822.1.1.1 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.65 40.0 4.76e-01 90.3% 96.7%
4338928 233.1.1.6 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 0.63 39.0 3.96e-01 95.7% 63.3%
5025174 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.62 28.0 3.25e-01 84.9% 57.1%
3501103 822.1.1.1 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.61 39.0 4.54e-01 90.3% 95.2%
3479367 822.1.1.1 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.61 40.0 4.56e-01 87.1% 96.9%
3922657 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 37.0 3.69e-01 73.1% 71.6%
327605 233.1.1.8 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › M157_N_1 0.52 41.0 3.31e-01 83.9% 74.3%