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IMGVR_UViG_3300005977_000041-3300005977-Ga0081474_12260616
Arc-VirIMGVR_UViG_3300005977_000041-3300005977-Ga0081474_12260616
Identity
- Kingdom:
- archaea
Quality
79.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-70
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21578.5 best | 117-like_vir | 81.8 | 6.70e-23 | 100.0% | 61.8% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.86 | 76.0 | 6.05e-01 | 100.0% | 50.9% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 50.0 | 4.36e-01 | 83.9% | 62.6% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 46.0 | 4.25e-01 | 79.0% | 61.4% |
| 3fgtA01 | 2.10.70.60 | Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 | 0.63 | 30.0 | 3.17e-01 | 100.0% | 41.8% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.60 | 49.0 | 3.44e-01 | 100.0% | 29.7% |
| 2c7yA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.59 | 48.0 | 2.98e-01 | 91.9% | 96.9% |
| 2qm0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 46.0 | 3.19e-01 | 90.3% | 84.0% |
| 1nnwB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.59 | 43.0 | 2.89e-01 | 79.0% | 50.6% |
| 3i3lA02 | 3.30.390.160 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.57 | 41.0 | 3.40e-01 | 79.0% | 72.0% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 46.0 | 3.46e-01 | 98.4% | 74.9% |
| 3zf8A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 42.0 | 2.84e-01 | 90.3% | 81.2% |
| 2b9dA01 | 3.30.160.330 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 30.0 | 3.35e-01 | 100.0% | 79.5% |
| 3venA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 38.0 | 2.71e-01 | 85.5% | 89.5% |
| 2uuxA01 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.51 | 25.0 | 3.12e-01 | 100.0% | 61.1% |
| 3h95A02 | 4.10.80.100 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.50 | 26.0 | 3.24e-01 | 100.0% | 93.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3624100 | 304.55.1.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains | 0.71 | 48.0 | 4.35e-01 | 72.6% | 51.8% |
| 3889987 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 50.0 | 3.73e-01 | 85.5% | 87.3% |
| 3811535 | 331.3.1.28 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 | 0.63 | 43.0 | 3.45e-01 | 71.0% | 85.6% |
| 3848744 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 50.0 | 3.02e-01 | 98.4% | 28.1% |
| 2738700 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.59 | 43.0 | 4.43e-01 | 79.0% | 84.5% |
| 3666034 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.57 | 41.0 | 3.51e-01 | 79.0% | 67.3% |
| 3396952 | 10.12.1.12 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD | 0.57 | 45.0 | 2.96e-01 | 88.7% | 80.4% |
| 3875763 | 3095.1.1.1 ↗ | extended segments › E-cadherin › E-cadherin › E-cadherin › CADH_Y-type_LIR | 0.56 | 38.0 | 3.64e-01 | 72.6% | 68.0% |
| 4848452 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.55 | 37.0 | 3.93e-01 | 74.2% | 89.8% |
| 3570056 | 198.1.1.4 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 | 0.55 | 32.0 | 2.90e-01 | 88.7% | 41.2% |
| 3251044 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.54 | 37.0 | 2.88e-01 | 79.0% | 29.2% |
| None | — | 0.54 | 45.0 | 2.83e-01 | 96.8% | 83.4% | |
| None | — | 0.54 | 45.0 | 2.85e-01 | 100.0% | 51.9% | |
| 4277768 | 223.2.1.52 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › GAP1-N2 | 0.53 | 40.0 | 3.14e-01 | 85.5% | 42.8% |
| 4205842 | 2003.1.5.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 | 0.51 | 41.0 | 2.89e-01 | 100.0% | 58.8% |
| 4500042 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.50 | 37.0 | 2.27e-01 | 83.9% | 84.9% |