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IMGVR_UViG_3300006090_000140-3300006090-Ga0082015_100005415

Arc-Vir

IMGVR_UViG_3300006090_000140-3300006090-Ga0082015_100005415

Quality

92.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-218
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00149.34 best Metallophos 36.6 9.10e-09 76.7% 54.6%
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ltyA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.85 81.0 7.32e-01 100.0% 96.4%
3av0A01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.82 78.0 7.38e-01 100.0% 96.8%
3thoB01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.81 77.0 7.28e-01 100.0% 98.0%
1ii7A01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.80 77.0 7.25e-01 100.0% 98.0%
3t1iD01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.80 76.0 6.77e-01 100.0% 96.2%
2xmoA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.78 74.0 6.36e-01 100.0% 89.5%
3d03A01 3.60.21.40 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain 0.76 45.0 5.74e-01 100.0% 96.2%
1uf3A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.71 67.0 6.58e-01 100.0% 96.5%
1hp1A01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.70 66.0 5.66e-01 100.0% 86.0%
3rl3A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.70 64.0 5.86e-01 97.2% 82.6%
7s0tF01 3.60.21.50 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › 0.68 65.0 5.62e-01 100.0% 82.4%
4dghA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.68 36.0 4.57e-01 96.3% 85.2%
5n6lA01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.59 53.0 4.94e-01 97.2% 95.2%
4uwmA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.58 53.0 4.46e-01 98.1% 99.4%
3ls9A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 53.0 4.62e-01 98.6% 96.0%
2dyuA01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.58 52.0 4.69e-01 97.2% 84.4%
1bqcA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 51.0 4.60e-01 96.3% 95.0%
2vhhA00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.57 52.0 4.42e-01 97.7% 69.3%
4h41B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 52.0 4.56e-01 99.5% 93.8%
4xkyA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 52.0 4.69e-01 100.0% 80.5%
4cqbA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.57 51.0 4.57e-01 98.1% 99.3%
3lerA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 4.64e-01 100.0% 97.6%
4uxdA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 52.0 4.78e-01 100.0% 84.7%
3n2xA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 52.0 4.65e-01 100.0% 99.3%
7lvlA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 4.65e-01 99.1% 100.0%
2r8wA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 4.62e-01 100.0% 98.7%
4nq1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 4.62e-01 100.0% 99.3%
2wqpA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 50.0 4.66e-01 98.1% 95.2%
1e8cB03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.56 35.0 4.19e-01 84.2% 94.4%
1f6kC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 51.0 4.66e-01 100.0% 99.3%
6arhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 51.0 4.56e-01 100.0% 100.0%
1o98A01 3.40.1450.10 Alpha Beta › 3-Layer(aba) Sandwich › 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain › BPG-independent phosphoglycerate mutase, domain B 0.55 46.0 4.52e-01 88.8% 97.0%
1vliA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 50.0 4.51e-01 98.6% 86.3%
4n4pD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 50.0 4.57e-01 100.0% 99.0%
1u1jA01 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.55 46.0 3.80e-01 90.7% 86.1%
1vpqA00 3.20.20.410 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Protein of unknown function UPF0759 0.54 49.0 4.66e-01 100.0% 100.0%
3tr9B00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.54 49.0 4.52e-01 97.7% 92.6%
4n6fA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 48.0 4.68e-01 98.6% 95.5%
1e5nA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 48.0 4.14e-01 99.1% 98.0%
6gs8A01 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.52 47.0 4.28e-01 99.1% 84.9%
1dqwA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 47.0 4.41e-01 98.6% 89.5%
7tbvB02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 47.0 4.55e-01 99.1% 94.2%
1ur1A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 47.0 4.03e-01 99.1% 96.8%
7d88A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 47.0 3.99e-01 99.5% 85.7%
2hisA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 46.0 4.12e-01 99.1% 97.4%
4d02A02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.51 34.0 4.03e-01 96.7% 100.0%
1e5dA01 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.50 34.0 3.99e-01 96.7% 100.0%
5v8sA02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.50 34.0 3.92e-01 97.7% 97.3%
1yh0A02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.50 37.0 4.10e-01 83.3% 95.3%
4ng4B01 3.40.50.1260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain 0.50 39.0 4.27e-01 87.0% 99.4%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947494 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.86 83.0 7.78e-01 100.0% 96.8%
4950967 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.86 82.0 7.74e-01 100.0% 98.0%
4956932 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.85 82.0 7.65e-01 100.0% 98.0%
4989875 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.85 82.0 7.72e-01 100.0% 97.6%
4939810 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.84 81.0 7.62e-01 100.0% 97.6%
3976919 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.84 81.0 7.28e-01 100.0% 96.8%
5036046 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.84 80.0 6.63e-01 100.0% 75.8%
3967796 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.84 80.0 7.18e-01 100.0% 96.8%
4519677 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.84 80.0 7.54e-01 100.0% 96.4%
5030742 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.84 80.0 7.47e-01 100.0% 96.1%
4988990 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.84 80.0 7.48e-01 100.0% 93.7%
5023513 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.83 80.0 7.40e-01 100.0% 98.1%
4974960 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.83 80.0 7.59e-01 100.0% 97.1%
5052858 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.83 79.0 7.09e-01 100.0% 93.7%
4376563 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.83 79.0 7.41e-01 100.0% 95.7%
5056713 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.83 79.0 7.52e-01 100.0% 97.6%
4476658 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.83 79.0 7.38e-01 100.0% 96.9%
4927458 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.83 79.0 7.45e-01 100.0% 96.8%
4981992 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.82 77.0 7.22e-01 98.1% 94.5%
4934333 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.82 78.0 7.47e-01 100.0% 96.3%
5014366 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.82 78.0 7.02e-01 100.0% 96.1%
4998780 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.82 78.0 7.11e-01 100.0% 98.2%
4995726 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.82 78.0 7.28e-01 100.0% 93.3%
5068243 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.82 78.0 7.61e-01 100.0% 98.3%
7876 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.80 77.0 6.99e-01 100.0% 93.0%
3175032 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.80 76.0 6.55e-01 100.0% 93.3%
3265915 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.79 75.0 6.39e-01 100.0% 91.2%
4026997 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.79 75.0 6.74e-01 100.0% 93.3%
4938013 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.78 57.0 6.48e-01 100.0% 97.5%
4137234 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.78 74.0 7.02e-01 100.0% 98.0%
4558153 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.78 74.0 6.74e-01 100.0% 89.4%
3256793 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.78 70.0 6.21e-01 95.3% 99.7%
4649256 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.78 74.0 6.81e-01 100.0% 95.1%
4397486 246.2.1.3 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,Metallophos_C 0.77 73.0 6.09e-01 100.0% 82.0%
4963907 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.77 74.0 6.43e-01 100.0% 81.0%
5048196 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.77 73.0 7.09e-01 100.0% 96.2%
3682204 246.2.1.3 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,Metallophos_C 0.77 73.0 6.17e-01 100.0% 93.1%
3328948 246.2.1.3 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,Metallophos_C 0.77 73.0 6.11e-01 100.0% 91.3%
5023985 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.76 72.0 6.45e-01 100.0% 85.5%
3718662 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.76 72.0 6.19e-01 100.0% 85.8%
4929689 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.75 72.0 6.86e-01 100.0% 91.8%
5079201 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.75 68.0 6.17e-01 95.8% 99.6%
3186913 246.2.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.72 67.0 5.95e-01 97.7% 96.6%
4948071 246.2.1.11 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_3 0.72 68.0 6.67e-01 100.0% 96.9%
4982610 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.72 66.0 6.45e-01 97.7% 98.7%
7866 246.2.1.11 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_3 0.71 67.0 6.57e-01 100.0% 96.1%
3619756 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.71 65.0 5.92e-01 96.7% 82.0%
5001057 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.71 67.0 6.69e-01 100.0% 99.1%
5035555 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.70 66.0 6.69e-01 100.0% 99.1%
4137713 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.69 63.0 6.02e-01 97.2% 84.7%
5072367 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.68 64.0 5.71e-01 99.5% 100.0%
3588314 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.67 57.0 5.95e-01 99.1% 95.5%
4942693 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.62 59.0 5.58e-01 99.5% 89.0%
5006921 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.61 48.0 5.13e-01 100.0% 92.6%
3279670 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.59 52.0 4.60e-01 94.9% 95.6%
5039538 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.59 56.0 5.33e-01 100.0% 86.8%
4976138 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.59 53.0 4.60e-01 97.7% 99.1%
4084178 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.56 51.0 4.94e-01 98.6% 100.0%
5058870 300.1.1.8 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.56 36.0 4.17e-01 94.4% 88.4%
3386823 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.56 51.0 4.61e-01 100.0% 99.0%
4091249 7554.1.1.1 a/b three-layered sandwiches › 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain › 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain › 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain › iPGM_N 0.56 46.0 4.62e-01 87.9% 98.6%
4483471 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.54 49.0 4.61e-01 100.0% 86.4%
D2 medium residues 233-268
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fp1D02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 59.0 3.64e-01 100.0% 16.2%
6i6lA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 59.0 3.58e-01 100.0% 14.8%
2qyoA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 55.0 3.40e-01 100.0% 15.3%
5iceA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 54.0 3.33e-01 100.0% 15.1%
5lqdD01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.64 51.0 3.21e-01 100.0% 33.3%
4hg2B01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 48.0 3.32e-01 100.0% 22.0%
8sfuB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 49.0 3.02e-01 100.0% 13.8%
6yubA02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.58 43.0 3.28e-01 97.2% 33.9%
3lm2A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 42.0 3.14e-01 100.0% 30.7%
3r2uA02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.56 40.0 3.27e-01 97.2% 35.7%
2x5oA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.52 38.0 2.83e-01 100.0% 33.3%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4080124 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.72 58.0 3.39e-01 100.0% 10.5%
4385628 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.72 58.0 3.55e-01 100.0% 15.1%
3440616 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.71 58.0 3.54e-01 100.0% 14.6%
4503143 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.71 55.0 3.19e-01 100.0% 9.9%
3401220 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.68 52.0 3.84e-01 100.0% 34.4%
5027612 7592.1.1.0 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.67 53.0 3.85e-01 100.0% 30.4%
3725065 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 49.0 2.91e-01 100.0% 10.5%
3408608 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.64 50.0 3.66e-01 100.0% 31.7%
3280942 7524.1.1.1 a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh 0.61 45.0 2.84e-01 100.0% 13.3%
4055211 2007.2.5.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese 0.58 42.0 3.22e-01 100.0% 49.6%
3405619 2.3.1.1 beta barrels › OB-fold › TIMP-like › TIMP-like › TIMP 0.58 39.0 2.63e-01 75.0% 14.9%
4984152 2007.2.5.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese 0.58 40.0 3.31e-01 91.7% 34.1%
3968926 2007.2.5.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese 0.57 44.0 3.39e-01 100.0% 42.9%
5061939 2493.1.1.4 a/b three-layered sandwiches › MurF and HprK N-domain-like › MurF and HprK N-domain-like › MurF and HprK N-domain-like › DRTGG 0.57 45.0 3.33e-01 100.0% 31.8%
4948247 7512.1.1.54 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 0.53 38.0 2.78e-01 100.0% 23.4%
3940281 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 40.0 2.82e-01 100.0% 38.8%
4667968 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.53 40.0 3.16e-01 100.0% 72.4%
5022503 2004.1.3.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.50 34.0 2.56e-01 97.2% 49.7%
D3 medium residues 284-319
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dkzA01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.86 61.0 5.01e-01 80.6% 44.3%
2keyA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.86 74.0 5.22e-01 100.0% 33.9%
3fewX02 3.30.1310.40 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › 0.83 57.0 4.13e-01 72.2% 27.4%
7y9hB01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.83 71.0 4.13e-01 100.0% 29.6%
6ukcA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.82 69.0 4.59e-01 94.4% 27.8%
1mjtB01 3.90.340.10 Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 0.82 68.0 4.65e-01 97.2% 27.1%
1n0uA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 66.0 4.13e-01 100.0% 29.5%
1z8fA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 62.0 4.30e-01 100.0% 26.4%
7d5qA01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.79 66.0 4.24e-01 100.0% 48.4%
2b0jA02 1.20.120.1300 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain 0.78 62.0 4.75e-01 100.0% 38.0%
2rinA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.77 56.0 3.63e-01 88.9% 16.9%
4yt2A02 1.20.120.1300 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain 0.77 62.0 4.53e-01 100.0% 33.0%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 58.0 3.55e-01 100.0% 14.8%
3iayA07 1.10.132.60 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain 0.69 58.0 3.82e-01 97.2% 71.7%
2f8lA01 1.10.150.470 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.69 52.0 4.02e-01 83.3% 38.3%
4csrA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.68 53.0 4.21e-01 97.2% 46.6%
3gl5A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 58.0 3.63e-01 100.0% 36.5%
1zq1C03 1.10.150.380 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GatB domain, N-terminal subdomain 0.67 49.0 4.36e-01 83.3% 52.6%
2db7A01 6.10.250.980 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 52.0 4.81e-01 97.2% 69.8%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.67 59.0 4.61e-01 100.0% 52.7%
3k5wA01 3.40.50.10260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain 0.65 51.0 3.19e-01 91.7% 18.4%
1qusA01 1.10.8.350 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase 0.65 56.0 3.94e-01 100.0% 31.9%
3emuA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.64 52.0 3.60e-01 100.0% 27.1%
1owfA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.63 51.0 3.94e-01 100.0% 38.5%
4aeeA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 46.0 2.75e-01 97.2% 11.4%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4160987 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.98 90.0 6.13e-01 100.0% 32.7%
4660849 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.95 85.0 5.62e-01 100.0% 27.7%
4959578 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.94 83.0 5.96e-01 97.2% 36.8%
5000879 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.93 82.0 5.65e-01 100.0% 31.3%
4932919 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.93 81.0 5.85e-01 94.4% 37.8%
4657272 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.93 84.0 5.87e-01 100.0% 34.3%
4044410 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.93 83.0 5.66e-01 100.0% 31.3%
4007596 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.92 63.0 5.59e-01 72.2% 52.0%
4667626 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.92 82.0 5.85e-01 100.0% 36.0%
4362692 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.91 81.0 5.76e-01 100.0% 36.0%
4996189 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 77.0 5.44e-01 100.0% 34.3%
4173849 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.88 75.0 5.29e-01 100.0% 32.7%
5080068 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.87 74.0 5.33e-01 97.2% 35.0%
5003091 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.86 69.0 5.87e-01 91.7% 55.0%
5039845 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.85 74.0 5.12e-01 97.2% 33.9%
3750535 181.1.1.21 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › PF30827 0.85 71.0 5.61e-01 100.0% 46.7%
3216945 101.1.1.102 alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 0.84 63.0 4.32e-01 88.9% 24.4%
3512954 102.1.1.1 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 0.83 69.0 5.31e-01 97.2% 42.5%
3837790 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.83 69.0 4.97e-01 100.0% 32.7%
5010441 5060.2.1.0 alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain 0.83 64.0 4.45e-01 88.9% 27.0%
5005755 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.82 69.0 4.30e-01 100.0% 17.1%
3732253 5001.1.1.85 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Fung_rhodopsin 0.81 63.0 3.65e-01 88.9% 11.1%
3242626 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 62.0 4.85e-01 86.1% 40.0%
4679957 304.103.1.1 a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase 0.81 70.0 4.33e-01 100.0% 55.5%
3174987 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.80 67.0 3.90e-01 100.0% 12.3%
5014507 2006.1.4.36 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_3 0.80 66.0 4.45e-01 97.2% 43.0%
3916572 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.78 63.0 5.70e-01 94.4% 66.0%
4954814 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.78 64.0 3.73e-01 100.0% 10.8%
4042981 4953.1.1.4 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.77 63.0 4.94e-01 100.0% 42.4%
3924261 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.77 61.0 4.95e-01 97.2% 45.3%
4639278 4953.1.1.4 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.77 64.0 5.14e-01 100.0% 48.0%
4980790 5067.1.1.0 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.76 61.0 3.92e-01 100.0% 19.0%
3389858 3379.1.1.0 extended segments › Photosystem II reaction center protein ycf12 › Photosystem II reaction center protein ycf12 › Photosystem II reaction center protein ycf12 0.74 57.0 5.53e-01 97.2% 77.8%
5041191 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.74 50.0 4.49e-01 80.6% 52.0%
3654282 108.1.1.20 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like 0.73 59.0 4.64e-01 97.2% 42.4%
3887634 109.4.1.2146 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27652, PF30701 0.73 55.0 3.08e-01 88.9% 7.4%
4244028 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.73 64.0 5.40e-01 100.0% 73.3%
1573779 3009.1.1.1 alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › DSBA 0.72 57.0 4.15e-01 94.4% 30.0%
4978574 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.72 59.0 3.88e-01 100.0% 50.9%
5001690 3276.1.1.0 alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor 0.72 56.0 4.79e-01 100.0% 70.0%
3566988 633.6.1.2 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX 0.71 63.0 4.23e-01 100.0% 58.5%
3469102 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.70 60.0 4.18e-01 100.0% 32.5%
3215052 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.69 56.0 4.42e-01 97.2% 42.4%
3580147 109.4.1.1505 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_FBXO47 0.69 58.0 3.35e-01 100.0% 10.6%
3607891 2484.1.1.16 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII 0.67 54.0 3.31e-01 100.0% 16.0%
3686534 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.66 46.0 4.43e-01 75.0% 62.2%
5002376 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 49.0 3.78e-01 97.2% 41.0%
4183750 101.17.1.1 alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.64 51.0 4.14e-01 100.0% 46.3%