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IMGVR_UViG_3300006204_000297-3300006204-Ga0081182_10005293
Arc-VirIMGVR_UViG_3300006204_000297-3300006204-Ga0081182_10005293
Identity
- Kingdom:
- archaea
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-141
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14297.13 best | Lin1244_N | 63.6 | 3.20e-17 | 71.4% | 87.5% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 45.0 | 5.36e-01 | 73.1% | 87.8% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 48.0 | 5.66e-01 | 70.6% | 95.1% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 46.0 | 5.61e-01 | 85.7% | 100.0% |
| 4gyiA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 46.0 | 5.18e-01 | 73.9% | 83.9% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 46.0 | 5.20e-01 | 70.6% | 87.9% |
| 3df8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 44.0 | 4.63e-01 | 74.8% | 69.7% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 42.0 | 4.86e-01 | 70.6% | 96.2% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 44.0 | 4.73e-01 | 74.8% | 83.2% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 41.0 | 4.64e-01 | 76.5% | 87.8% |
| 7dg2C01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.59 | 37.0 | 4.50e-01 | 84.9% | 100.0% |
| 2wa0A01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.57 | 39.0 | 4.18e-01 | 89.9% | 82.2% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.55 | 31.0 | 3.84e-01 | 75.6% | 98.4% |
| 1grlB01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.55 | 44.0 | 3.52e-01 | 86.6% | 91.0% |
| 2p9xA00 | 1.10.1200.200 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227 | 0.50 | 36.0 | 3.94e-01 | 100.0% | 91.8% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4498619 | 101.1.2.837 ↗ | alpha arrays › HTH › HTH › winged helix domain › Lin1244_N | 0.87 | 83.0 | 8.01e-01 | 100.0% | 91.5% |
| 5044560 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 56.0 | 4.44e-01 | 78.2% | 82.6% |
| 3971509 | 101.1.2.851 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27731 | 0.72 | 52.0 | 5.83e-01 | 84.0% | 97.8% |
| 4016908 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 47.0 | 4.36e-01 | 73.9% | 53.3% |
| 5030693 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 50.0 | 5.27e-01 | 73.9% | 81.9% |
| 3468855 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.71 | 49.0 | 4.44e-01 | 73.9% | 54.2% |
| 5078841 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 43.0 | 4.97e-01 | 88.2% | 86.7% |
| 4975263 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.70 | 46.0 | 5.27e-01 | 74.8% | 92.9% |
| 3744259 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.69 | 50.0 | 4.85e-01 | 73.9% | 69.2% |
| 3838246 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 50.0 | 5.21e-01 | 90.8% | 86.4% |
| 3669754 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 51.0 | 4.84e-01 | 82.4% | 95.0% |
| 3930465 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 47.0 | 4.97e-01 | 73.9% | 94.3% |
| 3264668 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.65 | 39.0 | 4.73e-01 | 80.7% | 93.3% |
| 3739430 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 42.0 | 4.71e-01 | 84.0% | 86.7% |
| 2325472 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.64 | 50.0 | 4.84e-01 | 87.4% | 73.5% |
| 4407982 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.64 | 41.0 | 4.77e-01 | 83.2% | 95.0% |
| 3351739 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.64 | 49.0 | 4.36e-01 | 79.8% | 61.8% |
| 3309668 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.63 | 44.0 | 4.85e-01 | 89.9% | 89.5% |
| 3608869 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 46.0 | 4.93e-01 | 74.8% | 100.0% |
| 4640327 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.63 | 50.0 | 4.83e-01 | 100.0% | 75.4% |
| 3314406 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.63 | 48.0 | 4.75e-01 | 79.8% | 82.4% |
| 4972865 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.63 | 48.0 | 4.92e-01 | 80.7% | 86.7% |
| 3279756 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.62 | 46.0 | 4.38e-01 | 83.2% | 65.7% |
| 5000260 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 54.0 | 4.87e-01 | 94.1% | 99.4% |
| 139744 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 4.71e-01 | 77.3% | 89.7% |
| 3598642 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 49.0 | 4.70e-01 | 91.6% | 75.9% |
| 3347816 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.60 | 44.0 | 4.54e-01 | 82.4% | 79.1% |
| 4135088 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.59 | 51.0 | 4.68e-01 | 91.6% | 79.3% |
| 4117256 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.59 | 44.0 | 4.28e-01 | 77.3% | 77.7% |
| 3621329 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.56 | 41.0 | 4.50e-01 | 77.3% | 97.9% |
| 2137469 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.56 | 51.0 | 4.80e-01 | 100.0% | 89.7% |
| None | — | 0.56 | 46.0 | 4.54e-01 | 89.1% | 87.6% | |
| 5065545 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.55 | 50.0 | 4.58e-01 | 99.2% | 80.6% |
| 2520598 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.55 | 51.0 | 4.93e-01 | 100.0% | 93.9% |
| 3286147 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.55 | 50.0 | 4.75e-01 | 100.0% | 87.9% |
| 3976180 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.55 | 49.0 | 4.08e-01 | 100.0% | 88.1% |
| 3518226 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 4.44e-01 | 89.1% | 84.8% |
| 5082043 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.54 | 48.0 | 4.61e-01 | 100.0% | 85.0% |
| 5049862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 46.0 | 4.04e-01 | 98.3% | 63.4% |
| 3818755 | 101.1.1.138 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD | 0.51 | 39.0 | 4.27e-01 | 84.0% | 100.0% |
| 2388377 | 109.2.1.36 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_36 | 0.50 | 43.0 | 2.90e-01 | 95.8% | 76.1% |
| 5078018 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.50 | 43.0 | 3.54e-01 | 96.6% | 90.1% |
D2
high
residues 203-293
Domain cluster:
rep: KT361651.1__ALA12465.1__HARRISON_65__00065__D175-260
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a5yB03 | 1.10.8.490 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ced-4 linker helical domain-like | 0.69 | 52.0 | 5.49e-01 | 87.9% | 92.3% |
| 1z6tA03 | 1.10.8.430 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Helical domain of apoptotic protease-activating factors | 0.68 | 52.0 | 5.43e-01 | 81.3% | 97.5% |
| 4ye6A01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.67 | 53.0 | 5.07e-01 | 93.4% | 75.0% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 49.0 | 5.12e-01 | 80.2% | 97.6% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 50.0 | 5.03e-01 | 81.3% | 98.9% |
| 2w4sA00 | 1.10.10.1440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain | 0.65 | 47.0 | 4.89e-01 | 76.9% | 84.9% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.63 | 44.0 | 4.64e-01 | 71.4% | 86.4% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 46.0 | 4.72e-01 | 80.2% | 97.7% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.61 | 45.0 | 4.46e-01 | 76.9% | 100.0% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 50.0 | 5.21e-01 | 90.1% | 100.0% |
| 3pvlA03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.61 | 43.0 | 3.93e-01 | 100.0% | 56.8% |
| 3qybA03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.60 | 48.0 | 4.30e-01 | 89.0% | 78.8% |
| 4gmqA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.60 | 43.0 | 4.36e-01 | 76.9% | 85.9% |
| 3nkeA00 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.59 | 46.0 | 3.73e-01 | 84.6% | 66.1% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.59 | 41.0 | 4.11e-01 | 72.5% | 74.5% |
| 4bg5B00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.58 | 48.0 | 3.84e-01 | 94.5% | 77.4% |
| 3jyhA02 | 1.20.120.980 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine carboxypeptidase S28, SKS domain | 0.57 | 44.0 | 3.75e-01 | 81.3% | 87.2% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.57 | 43.0 | 3.66e-01 | 81.3% | 75.5% |
| 4ou7A00 | 1.10.8.1180 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 38.0 | 4.17e-01 | 74.7% | 87.3% |
| 1ybhA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.56 | 40.0 | 3.22e-01 | 75.8% | 69.4% |
| 2kvsA00 | 1.10.150.260 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like | 0.56 | 32.0 | 3.46e-01 | 94.5% | 63.7% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 47.0 | 3.47e-01 | 98.9% | 55.5% |
| 3i1aA03 | 1.20.58.840 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 38.0 | 3.62e-01 | 76.9% | 91.4% |
| 2azjA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 45.0 | 3.28e-01 | 100.0% | 49.6% |
| 4pdyA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.50 | 39.0 | 2.97e-01 | 84.6% | 83.3% |
| 3nuwA02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.50 | 36.0 | 2.87e-01 | 75.8% | 42.0% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4048400 | 4230.1.1.3 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 | 0.77 | 63.0 | 6.52e-01 | 89.0% | 95.3% |
| 3256076 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 60.0 | 6.19e-01 | 90.1% | 90.6% |
| 5004668 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.71 | 63.0 | 5.26e-01 | 100.0% | 77.5% |
| 3965492 | 101.35.1.21 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF494 | 0.71 | 49.0 | 5.34e-01 | 74.7% | 86.7% |
| 4033485 | 571.1.1.1 ↗ | alpha arrays › Replisome organizer (g39p helicase loader/inhibitor protein) › Replisome organizer (g39p helicase loader/inhibitor protein) › Replisome organizer (g39p helicase loader/inhibitor protein) › G39P_N | 0.70 | 48.0 | 5.47e-01 | 81.3% | 98.5% |
| 4224947 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.69 | 51.0 | 4.88e-01 | 78.0% | 81.9% |
| 3914006 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 53.0 | 5.63e-01 | 90.1% | 95.0% |
| 3971575 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 48.0 | 4.87e-01 | 73.6% | 75.6% |
| 3974633 | 5038.2.1.1 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG | 0.68 | 47.0 | 4.23e-01 | 72.5% | 100.0% |
| 4153047 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.66 | 53.0 | 4.52e-01 | 86.8% | 79.3% |
| 3744063 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.66 | 54.0 | 4.44e-01 | 90.1% | 63.5% |
| 5077144 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.66 | 47.0 | 3.71e-01 | 76.9% | 75.1% |
| 5004667 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.64 | 56.0 | 5.53e-01 | 98.9% | 94.7% |
| 3499902 | 181.1.1.12 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SCAF11-like_C | 0.64 | 43.0 | 4.73e-01 | 70.3% | 90.5% |
| 4026130 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.64 | 49.0 | 4.25e-01 | 83.5% | 69.0% |
| 4284927 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.64 | 37.0 | 4.49e-01 | 70.3% | 91.4% |
| 5054797 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.63 | 35.0 | 4.14e-01 | 71.4% | 81.7% |
| 4012343 | 4049.1.1.2 ↗ | alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › Sirohm_synth_C | 0.62 | 48.0 | 5.02e-01 | 91.2% | 93.8% |
| 3231234 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.61 | 47.0 | 4.28e-01 | 85.7% | 86.2% |
| 4283232 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.61 | 36.0 | 4.19e-01 | 73.6% | 88.3% |
| 3178208 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.60 | 51.0 | 4.17e-01 | 95.6% | 68.6% |
| 5028520 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.60 | 52.0 | 4.28e-01 | 100.0% | 54.3% |
| 3243409 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.59 | 46.0 | 4.10e-01 | 87.9% | 75.7% |
| 3495552 | 524.1.1.5 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › BROMI_C | 0.57 | 42.0 | 3.68e-01 | 76.9% | 68.1% |
| 2043430 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.57 | 45.0 | 3.92e-01 | 86.8% | 73.1% |
| 3212986 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.57 | 45.0 | 3.94e-01 | 86.8% | 74.5% |
| 3213401 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 46.0 | 4.68e-01 | 90.1% | 94.4% |
| 5059586 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.56 | 35.0 | 3.74e-01 | 95.6% | 72.2% |
| 3744661 | 524.1.1.3 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGap-TBC_2 | 0.56 | 47.0 | 4.19e-01 | 94.5% | 85.2% |
| 3266296 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.55 | 42.0 | 3.78e-01 | 86.8% | 70.0% |
| 3932277 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 43.0 | 3.21e-01 | 89.0% | 78.0% |
| 3431353 | 1128.1.1.10 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › VIN3_C | 0.53 | 37.0 | 4.10e-01 | 73.6% | 98.6% |
| 4392393 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.52 | 45.0 | 3.27e-01 | 100.0% | 48.9% |
| 3496813 | 304.110.1.7 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › TEX47 | 0.51 | 43.0 | 3.41e-01 | 95.6% | 84.4% |