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IMGVR_UViG_3300006225_000030-3300006225-Ga0082206_1019891

Arc-Vir

IMGVR_UViG_3300006225_000030-3300006225-Ga0082206_1019891

Identity

Kingdom:
archaea

Quality

72.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-152
PDB
Domain cluster: rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00157__D2-120
D2 high residues 172-303
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 32.0 4.27e-01 73.5% 91.3%
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 48.0 4.76e-01 81.8% 83.8%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 46.0 4.25e-01 77.3% 75.6%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 30.0 4.00e-01 72.0% 90.9%
1o7dD01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.61 55.0 4.32e-01 97.0% 49.8%
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 4.07e-01 81.1% 85.6%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.57 36.0 4.27e-01 82.6% 93.3%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 47.0 4.59e-01 100.0% 80.1%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 44.0 4.53e-01 82.6% 100.0%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 4.62e-01 81.8% 99.0%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 45.0 4.85e-01 90.9% 99.1%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 4.66e-01 87.9% 89.8%
3nv0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.83e-01 81.8% 90.8%
3cnxA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 4.28e-01 81.1% 99.3%
3f7sA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 4.23e-01 81.8% 95.8%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 4.32e-01 81.8% 96.8%
1pbyB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 3.33e-01 90.2% 38.6%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.52 44.0 3.37e-01 92.4% 44.9%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.97e-01 78.0% 98.4%
2qiyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 4.08e-01 82.6% 100.0%
3cebA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.52 26.0 3.13e-01 75.0% 71.8%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 41.0 4.16e-01 87.1% 99.2%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3258377 331.23.1.0 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.65 38.0 4.50e-01 76.5% 84.4%
3668294 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.65 59.0 4.63e-01 100.0% 56.0%
4059480 881.1.1.37 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 0.64 38.0 3.46e-01 70.5% 43.4%
4554156 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.63 59.0 4.62e-01 100.0% 52.3%
4030473 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 40.0 2.82e-01 75.0% 20.7%
3587340 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 39.0 4.81e-01 87.1% 100.0%
3893447 243.1.1.40 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.61 46.0 4.08e-01 80.3% 81.0%
5031081 243.3.1.59 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GvpO 0.60 34.0 4.26e-01 92.4% 91.3%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.60 32.0 4.07e-01 73.5% 89.3%
3859609 243.1.1.40 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.59 46.0 4.10e-01 81.8% 87.4%
3581448 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 39.0 4.22e-01 72.7% 78.3%
3576754 809.1.1.0 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.58 37.0 4.02e-01 70.5% 76.4%
3990824 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 39.0 4.62e-01 72.7% 100.0%
3593382 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 47.0 3.34e-01 89.4% 61.4%
3217155 243.1.1.97 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382_N 0.57 49.0 4.71e-01 93.2% 94.7%
4985869 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.57 33.0 3.86e-01 85.6% 82.0%
3727006 243.1.1.9 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF1348 0.57 50.0 4.63e-01 94.7% 78.7%
4178004 274.1.1.1 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › Pilin 0.55 39.0 4.08e-01 99.2% 80.0%
3603591 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 46.0 3.42e-01 93.2% 44.2%
3622698 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 46.0 3.44e-01 93.2% 46.8%
4540639 243.1.1.5 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44 0.53 39.0 4.02e-01 78.8% 96.2%
3820829 5.1.5.66 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.52 38.0 2.89e-01 90.9% 32.5%
4015830 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 3.18e-01 98.5% 58.5%
3398140 4.1.1.326 ↗ beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 0.52 29.0 3.72e-01 84.8% 96.0%
4025179 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 43.0 3.73e-01 89.4% 72.2%
3559756 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 43.0 3.26e-01 91.7% 53.3%
3217508 243.1.1.97 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382_N 0.51 43.0 4.38e-01 90.9% 100.0%
3383213 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 43.0 3.27e-01 90.9% 44.9%
3723840 5.1.3.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 0.50 42.0 3.10e-01 91.7% 40.8%
3621147 5.1.4.166 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_DCAF4 0.50 42.0 2.98e-01 90.9% 39.4%