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IMGVR_UViG_3300006225_000040-3300006225-Ga0082206_10209616
Arc-VirIMGVR_UViG_3300006225_000040-3300006225-Ga0082206_10209616
Identity
- Kingdom:
- archaea
Quality
84.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-66
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l2pA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.59 | 42.0 | 3.51e-01 | 100.0% | 41.7% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 40.0 | 3.67e-01 | 73.8% | 95.4% |
| 2g9gA00 | 2.60.120.1020 | Mainly Beta › Sandwich › Jelly Rolls › PAW domain | 0.57 | 49.0 | 3.60e-01 | 100.0% | 83.6% |
| 3vnnA00 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.56 | 43.0 | 3.58e-01 | 100.0% | 45.2% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 37.0 | 4.08e-01 | 100.0% | 90.0% |
| 3luuA00 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.54 | 44.0 | 4.04e-01 | 98.5% | 67.4% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.52 | 45.0 | 3.98e-01 | 100.0% | 74.2% |
| 2khjA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 33.0 | 3.08e-01 | 98.5% | 48.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5066075 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.67 | 47.0 | 3.38e-01 | 100.0% | 25.1% |
| 5020579 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 42.0 | 3.66e-01 | 80.0% | 88.9% |
| 3284924 | 5.1.3.48 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 | 0.51 | 43.0 | 2.91e-01 | 100.0% | 97.9% |