IMGVR_UViG_3300006225_000045-3300006225-Ga0082206_10214310

Arc-Vir

Identity

71.2 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-75

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF25209.3 best	Phage_capsid_4	29.4	1.30e-06	100.0%	28.4%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4uhiA01	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.54	43.0	2.77e-01	91.9%	57.9%
4at7A02	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.52	42.0	3.43e-01	94.6%	81.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3358972	1.1.7.120 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF7271	0.61	34.0	3.42e-01	97.3%	53.3%
5082299	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.58	25.0	2.33e-01	71.6%	29.5%
3972409	327.16.1.3 ↗	a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N	0.55	29.0	3.23e-01	87.8%	63.3%
5068697	304.24.1.0 ↗	a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like	0.54	44.0	3.97e-01	91.9%	85.7%
4184822	2002.1.1.69 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MM_CoA_mutase	0.52	45.0	2.64e-01	97.3%	73.6%

D2 medium residues 76-129

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1im3D00	2.60.40.1200	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.60	34.0	2.89e-01	98.1%	28.4%
1yb2A00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.55	41.0	2.76e-01	100.0%	19.1%
2cz4A00	3.30.70.120	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.51	36.0	3.04e-01	75.9%	92.9%
1cov100	2.60.120.20	Mainly Beta › Sandwich › Jelly Rolls ›	0.51	36.0	2.38e-01	77.8%	18.6%
4q9cA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	44.0	3.56e-01	98.1%	88.6%
4msvA01	2.60.120.40	Mainly Beta › Sandwich › Jelly Rolls ›	0.50	33.0	2.65e-01	85.2%	28.5%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3559191	1086.1.1.0 ↗	beta meanders › C-terminal beta-hairpin in astrotactin-2 › C-terminal beta-hairpin in astrotactin-2 › C-terminal beta-hairpin in astrotactin-2	0.53	38.0	3.85e-01	87.0%	78.2%
3526189	10.3.1.1 ↗	beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF	0.51	34.0	2.63e-01	85.2%	24.7%