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IMGVR_UViG_3300006225_000045-3300006225-Ga0082206_1021436
Arc-VirIMGVR_UViG_3300006225_000045-3300006225-Ga0082206_1021436
Identity
- Kingdom:
- archaea
Quality
89.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-82_84-99
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09956.16 best | Phage_cement_2 | 27.4 | 5.10e-06 | 98.9% | 77.7% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.58 | 31.0 | 3.98e-01 | 88.5% | 95.8% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.57 | 30.0 | 3.77e-01 | 87.4% | 88.2% |
| 2kcoA01 | 2.40.10.310 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 40.0 | 4.28e-01 | 98.9% | 88.2% |
| 6xgqb01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.54 | 49.0 | 4.82e-01 | 100.0% | 98.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5064404 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.60 | 38.0 | 4.51e-01 | 83.9% | 93.3% |
| 2389402 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.56 | 30.0 | 3.64e-01 | 88.5% | 83.3% |
| 4151528 | 1077.1.1.1 ↗ | few secondary structure elements › RelA zinc-finger domain › RelA zinc-finger domain › RelA zinc-finger domain › RelA_RIS | 0.54 | 33.0 | 3.92e-01 | 83.9% | 96.4% |
| 4009008 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.51 | 32.0 | 3.84e-01 | 88.5% | 100.0% |