←Back to structures
IMGVR_UViG_3300006257_000069-3300006257-Ga0099346_1025153
Arc-VirIMGVR_UViG_3300006257_000069-3300006257-Ga0099346_1025153
Identity
- Kingdom:
- archaea
Quality
72.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-77
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ke6B01 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.66 | 52.0 | 3.70e-01 | 85.9% | 94.1% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 43.0 | 3.80e-01 | 70.4% | 49.0% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.63 | 42.0 | 2.98e-01 | 70.4% | 60.6% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 43.0 | 4.04e-01 | 71.8% | 86.2% |
| 3fmgA02 | 2.60.120.800 | Mainly Beta › Sandwich › Jelly Rolls › Rotavirus outer-layer protein VP7, domain 2 | 0.61 | 42.0 | 3.95e-01 | 71.8% | 83.9% |
| 2iz4A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.60 | 29.0 | 3.42e-01 | 94.4% | 65.3% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 40.0 | 3.35e-01 | 87.3% | 39.7% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.34e-01 | 81.7% | 91.3% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 40.0 | 3.65e-01 | 71.8% | 52.5% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 38.0 | 3.58e-01 | 85.9% | 53.4% |
| 2vecA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 39.0 | 3.25e-01 | 70.4% | 39.5% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.21e-01 | 84.5% | 91.7% |
| 1pjuA01 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.57 | 40.0 | 4.17e-01 | 73.2% | 85.7% |
| 2wb7A02 | 2.60.40.2050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 3.09e-01 | 71.8% | 87.7% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 46.0 | 4.12e-01 | 90.1% | 87.1% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 4.21e-01 | 84.5% | 89.9% |
| 5iqlA00 | 2.60.40.1970 | Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain | 0.56 | 38.0 | 3.22e-01 | 71.8% | 70.8% |
| 1tq5A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 38.0 | 3.19e-01 | 70.4% | 43.2% |
| 3kptB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.63e-01 | 80.3% | 64.8% |
| 1wb1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 39.0 | 3.63e-01 | 74.6% | 93.5% |
| 6xaxA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.07e-01 | 84.5% | 91.8% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.55 | 36.0 | 3.79e-01 | 84.5% | 72.7% |
| 4lplA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 38.0 | 3.14e-01 | 71.8% | 60.6% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.55 | 42.0 | 3.55e-01 | 84.5% | 85.4% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.87e-01 | 84.5% | 82.6% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.53 | 41.0 | 3.54e-01 | 84.5% | 90.5% |
| 2gy5A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.72e-01 | 84.5% | 83.8% |
| 2x1wO01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.74e-01 | 84.5% | 84.2% |
| 4uwqB00 | 2.60.40.2470 | Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain | 0.53 | 40.0 | 3.54e-01 | 84.5% | 63.1% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.52 | 40.0 | 3.34e-01 | 84.5% | 93.1% |
| 5dudC02 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.52 | 40.0 | 3.29e-01 | 84.5% | 75.2% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 36.0 | 3.41e-01 | 88.7% | 60.2% |
| 3b34A04 | 2.60.40.1840 | Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain | 0.51 | 40.0 | 3.58e-01 | 87.3% | 82.4% |
| 8bvoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.65e-01 | 84.5% | 96.5% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.51 | 38.0 | 2.85e-01 | 84.5% | 87.3% |
| 2zuoA01 | 2.30.30.570 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 36.0 | 3.96e-01 | 83.1% | 98.2% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 37.0 | 2.96e-01 | 81.7% | 55.7% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.50 | 38.0 | 3.30e-01 | 85.9% | 87.7% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.50 | 36.0 | 3.17e-01 | 78.9% | 68.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4980022 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 39.0 | 4.54e-01 | 71.8% | 86.0% |
| 5039333 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.65 | 44.0 | 4.34e-01 | 70.4% | 90.7% |
| 3219446 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.64 | 43.0 | 3.77e-01 | 70.4% | 56.4% |
| 331943 | 10.12.1.27 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 | 0.64 | 43.0 | 3.62e-01 | 70.4% | 42.9% |
| 3969516 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.63 | 45.0 | 3.29e-01 | 76.1% | 55.0% |
| 5041352 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 42.0 | 3.56e-01 | 70.4% | 51.2% |
| 3992541 | 10.32.1.205 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ams1-like_1st | 0.63 | 42.0 | 3.40e-01 | 70.4% | 44.8% |
| 5057182 | 11.1.1.1422 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7406 | 0.63 | 40.0 | 4.28e-01 | 84.5% | 76.7% |
| 3996048 | 11.1.1.161 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII | 0.60 | 41.0 | 3.47e-01 | 70.4% | 55.8% |
| 3219055 | 10.4.1.32 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_2nd | 0.60 | 40.0 | 3.42e-01 | 70.4% | 52.0% |
| 5040615 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.59 | 40.0 | 3.43e-01 | 70.4% | 56.0% |
| 3738766 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.59 | 41.0 | 3.29e-01 | 71.8% | 64.1% |
| 3507753 | 11.1.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Zona_pellucida | 0.58 | 39.0 | 3.35e-01 | 70.4% | 75.8% |
| 3215049 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.57 | 39.0 | 3.36e-01 | 70.4% | 70.4% |
| 4964264 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 45.0 | 3.85e-01 | 85.9% | 84.3% |
| 3724295 | 72.1.1.0 ↗ | beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like | 0.56 | 40.0 | 3.66e-01 | 91.5% | 55.0% |
| 3501665 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.56 | 43.0 | 3.36e-01 | 87.3% | 97.2% |
| 3328311 | 11.1.1.67 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 | 0.56 | 43.0 | 3.54e-01 | 84.5% | 90.4% |
| 3866097 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.56 | 38.0 | 2.86e-01 | 70.4% | 41.6% |
| 4954979 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.36e-01 | 85.9% | 81.3% |
| 3885093 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 42.0 | 4.06e-01 | 84.5% | 89.4% |
| 3284300 | 11.1.1.948 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF31173 | 0.55 | 42.0 | 3.77e-01 | 84.5% | 90.5% |
| 3942355 | 10.12.1.128 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DUF6016 | 0.55 | 44.0 | 3.68e-01 | 95.8% | 70.3% |
| 4526825 | 11.1.1.67 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 | 0.55 | 42.0 | 3.56e-01 | 84.5% | 84.0% |
| 3542412 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.54 | 37.0 | 2.82e-01 | 70.4% | 42.8% |
| 4959031 | 11.4.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) | 0.54 | 42.0 | 3.56e-01 | 85.9% | 94.4% |
| 3840563 | 11.1.1.67 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 | 0.54 | 41.0 | 3.21e-01 | 84.5% | 70.0% |
| 3179802 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.54 | 31.0 | 3.69e-01 | 77.5% | 97.5% |
| 3940888 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.53 | 36.0 | 3.07e-01 | 70.4% | 65.4% |
| 3626062 | 11.1.1.842 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C | 0.53 | 41.0 | 3.22e-01 | 85.9% | 73.9% |
| 4958583 | 11.4.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) | 0.53 | 40.0 | 3.39e-01 | 85.9% | 93.3% |
| 3603541 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 39.0 | 3.65e-01 | 80.3% | 94.4% |
| 3216579 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.53 | 35.0 | 3.34e-01 | 70.4% | 75.6% |
| 3498932 | 10.32.1.73 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 | 0.53 | 44.0 | 3.70e-01 | 97.2% | 76.9% |
| 4931900 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.37e-01 | 84.5% | 92.8% |
| 3800848 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.52 | 37.0 | 3.29e-01 | 76.1% | 80.0% |
| 3664232 | 12.5.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › DUF1191 | 0.52 | 42.0 | 3.14e-01 | 91.5% | 44.7% |
| 5041899 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 35.0 | 3.12e-01 | 73.2% | 86.7% |
| 1031025 | 11.1.1.155 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3458 | 0.52 | 42.0 | 3.78e-01 | 91.5% | 84.3% |
| 3226095 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.51 | 36.0 | 3.41e-01 | 73.2% | 92.9% |
| 5010338 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 35.0 | 3.12e-01 | 74.6% | 99.1% |
| 3869986 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.50 | 37.0 | 2.88e-01 | 81.7% | 49.7% |
| 3941369 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.50 | 38.0 | 3.63e-01 | 83.1% | 82.4% |
| 4648393 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.50 | 39.0 | 3.14e-01 | 87.3% | 54.7% |