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IMGVR_UViG_3300006308_000160-3300006308-Ga0068470_11360516
Arc-VirIMGVR_UViG_3300006308_000160-3300006308-Ga0068470_11360516
Identity
- Kingdom:
- archaea
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-64
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.93 | 87.0 | 6.32e-01 | 100.0% | 41.7% |
| 7c9rH01 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.92 | 86.0 | 6.04e-01 | 100.0% | 38.5% |
| 1pm3A00 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.87 | 79.0 | 7.23e-01 | 100.0% | 78.3% |
| 3htrA00 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.85 | 77.0 | 6.24e-01 | 100.0% | 63.3% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.77 | 70.0 | 5.99e-01 | 100.0% | 78.3% |
| 1g6zA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.77 | 58.0 | 5.27e-01 | 79.6% | 65.7% |
| 1d4cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.72 | 61.0 | 3.74e-01 | 94.4% | 57.7% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 53.0 | 5.50e-01 | 96.3% | 86.0% |
| 1mo9A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 58.0 | 4.28e-01 | 88.9% | 49.6% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 53.0 | 4.31e-01 | 85.2% | 71.6% |
| 1ju2A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.67 | 56.0 | 3.48e-01 | 94.4% | 54.8% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 53.0 | 5.20e-01 | 98.1% | 79.7% |
| 5ygqA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.67 | 56.0 | 4.31e-01 | 92.6% | 99.2% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.66 | 44.0 | 4.32e-01 | 79.6% | 63.8% |
| 5j60B02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 55.0 | 4.26e-01 | 92.6% | 70.8% |
| 3mmyA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 47.0 | 2.90e-01 | 81.5% | 17.8% |
| 1eqnB01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.64 | 46.0 | 3.58e-01 | 79.6% | 61.1% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.63 | 47.0 | 4.70e-01 | 83.3% | 85.7% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 51.0 | 4.74e-01 | 92.6% | 71.0% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 53.0 | 4.94e-01 | 94.4% | 92.6% |
| 4hspA00 | 2.40.50.870 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function (DUF3299) | 0.62 | 46.0 | 3.51e-01 | 85.2% | 96.6% |
| 3lrrA00 | 2.170.150.30 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain | 0.62 | 43.0 | 3.39e-01 | 81.5% | 33.1% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 53.0 | 5.14e-01 | 96.3% | 88.1% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 51.0 | 4.80e-01 | 94.4% | 100.0% |
| 4nspA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.61 | 48.0 | 3.22e-01 | 90.7% | 73.5% |
| 5lznA00 | 3.10.20.360 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › CKK domain | 0.61 | 51.0 | 4.18e-01 | 100.0% | 63.1% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 52.0 | 4.99e-01 | 96.3% | 87.1% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 45.0 | 3.95e-01 | 83.3% | 80.7% |
| 2k52A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 46.0 | 4.20e-01 | 85.2% | 85.1% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.60 | 43.0 | 2.99e-01 | 79.6% | 24.9% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 47.0 | 4.50e-01 | 90.7% | 75.8% |
| 4phtY02 | 3.30.420.370 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain | 0.59 | 41.0 | 3.96e-01 | 74.1% | 80.6% |
| 3irpX01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 44.0 | 3.30e-01 | 85.2% | 91.4% |
| 1wubA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.59 | 46.0 | 3.37e-01 | 92.6% | 94.9% |
| 2py5A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 43.0 | 3.06e-01 | 81.5% | 26.1% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 46.0 | 4.32e-01 | 88.9% | 71.6% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 43.0 | 3.45e-01 | 90.7% | 93.1% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 48.0 | 4.88e-01 | 98.1% | 100.0% |
| 3my2A00 | 2.60.450.10 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain | 0.56 | 40.0 | 3.17e-01 | 77.8% | 86.5% |
| 2i4lA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 41.0 | 2.59e-01 | 83.3% | 41.2% |
| 1aorA02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.55 | 45.0 | 3.17e-01 | 92.6% | 33.9% |
| 1d0cA02 | 3.90.440.10 | Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase;Heme Domain; Chain A, domain 2 › Nitric Oxide Synthase;Heme Domain;Chain A domain 2 | 0.55 | 40.0 | 3.38e-01 | 83.3% | 87.4% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.54 | 39.0 | 3.56e-01 | 83.3% | 73.2% |
| 7bsbI01 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.54 | 42.0 | 3.33e-01 | 90.7% | 91.3% |
| 1cd9D01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.17e-01 | 77.8% | 86.9% |
| 2khjA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 3.65e-01 | 88.9% | 76.4% |
| 3girA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.53 | 44.0 | 4.04e-01 | 100.0% | 69.2% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.53 | 46.0 | 2.59e-01 | 100.0% | 45.3% |
| 4wj7D00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 44.0 | 3.51e-01 | 100.0% | 74.0% |
| 2if7A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.07e-01 | 75.9% | 77.9% |
| 8ew8A01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.52 | 40.0 | 2.85e-01 | 98.1% | 82.8% |
| 2wzpP03 | 2.60.120.880 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 41.0 | 3.30e-01 | 94.4% | 64.6% |
| 1rjtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 39.0 | 3.70e-01 | 88.9% | 71.2% |
| 3aqgB00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.52 | 41.0 | 3.20e-01 | 94.4% | 74.6% |
| 1b66A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.52 | 39.0 | 2.94e-01 | 81.5% | 91.3% |
| 2a6hC05 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 42.0 | 3.80e-01 | 92.6% | 80.0% |
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 39.0 | 2.92e-01 | 92.6% | 70.6% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928169 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.98 | 91.0 | 9.19e-01 | 98.1% | 98.1% |
| 5025280 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.96 | 91.0 | 7.44e-01 | 100.0% | 72.2% |
| 4888615 | 4.6.1.1 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.93 | 88.0 | 5.53e-01 | 100.0% | 30.2% |
| 322883 | 4.6.1.1 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.93 | 87.0 | 5.53e-01 | 100.0% | 24.4% |
| 5035835 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.93 | 87.0 | 8.38e-01 | 100.0% | 90.0% |
| 3955873 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.92 | 86.0 | 7.76e-01 | 100.0% | 85.7% |
| 5027131 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.92 | 86.0 | 8.31e-01 | 100.0% | 91.7% |
| 4928143 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.91 | 74.0 | 7.20e-01 | 98.1% | 79.7% |
| 4995084 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.91 | 84.0 | 7.09e-01 | 100.0% | 77.6% |
| 4940157 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.91 | 79.0 | 7.87e-01 | 100.0% | 90.9% |
| 4973635 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.90 | 84.0 | 5.79e-01 | 100.0% | 35.6% |
| 5058926 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.90 | 83.0 | 7.34e-01 | 100.0% | 77.3% |
| 5081858 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.90 | 83.0 | 7.01e-01 | 100.0% | 64.7% |
| 5033509 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.90 | 83.0 | 6.84e-01 | 100.0% | 75.6% |
| 5024232 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.90 | 83.0 | 6.71e-01 | 100.0% | 73.7% |
| 5010554 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.90 | 81.0 | 7.55e-01 | 100.0% | 81.5% |
| 4928438 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.90 | 73.0 | 7.15e-01 | 98.1% | 81.0% |
| 4975479 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.89 | 83.0 | 7.49e-01 | 100.0% | 82.9% |
| 3602773 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.89 | 82.0 | 7.24e-01 | 100.0% | 88.0% |
| 4928790 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.88 | 73.0 | 6.63e-01 | 100.0% | 68.6% |
| 4928523 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.88 | 70.0 | 6.85e-01 | 94.4% | 79.3% |
| 626 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.87 | 79.0 | 7.23e-01 | 100.0% | 78.3% |
| 4988955 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.87 | 76.0 | 7.40e-01 | 100.0% | 88.3% |
| 4224041 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.85 | 79.0 | 7.00e-01 | 100.0% | 76.0% |
| 4993200 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.85 | 79.0 | 6.96e-01 | 100.0% | 82.7% |
| 5069121 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.85 | 79.0 | 7.62e-01 | 100.0% | 90.0% |
| 5000503 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.84 | 79.0 | 6.24e-01 | 100.0% | 54.0% |
| 5037870 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.84 | 77.0 | 6.84e-01 | 100.0% | 72.0% |
| 5042177 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.84 | 76.0 | 6.60e-01 | 100.0% | 73.8% |
| 5061065 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.84 | 69.0 | 6.89e-01 | 100.0% | 87.3% |
| 4933080 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.83 | 76.0 | 7.14e-01 | 100.0% | 83.1% |
| 3621211 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 55.0 | 6.18e-01 | 75.9% | 92.5% |
| 4150396 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.83 | 76.0 | 6.76e-01 | 100.0% | 75.7% |
| 4974065 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.82 | 75.0 | 7.22e-01 | 100.0% | 91.7% |
| 4929550 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.82 | 75.0 | 6.80e-01 | 100.0% | 80.0% |
| 4590247 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.81 | 73.0 | 6.33e-01 | 100.0% | 76.2% |
| 5039290 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.80 | 73.0 | 6.48e-01 | 100.0% | 86.7% |
| 3616769 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.77 | 63.0 | 5.25e-01 | 90.7% | 57.9% |
| 638 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.77 | 58.0 | 5.27e-01 | 79.6% | 65.7% |
| 3581817 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.75 | 64.0 | 6.02e-01 | 94.4% | 83.1% |
| 3794500 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.74 | 62.0 | 4.30e-01 | 94.4% | 31.4% |
| 4330184 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.73 | 62.0 | 4.67e-01 | 92.6% | 97.6% |
| 4000622 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.73 | 63.0 | 4.83e-01 | 96.3% | 44.2% |
| 4990487 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.72 | 63.0 | 5.79e-01 | 100.0% | 81.4% |
| 2095015 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.72 | 60.0 | 3.86e-01 | 94.4% | 69.8% |
| None | — | 0.71 | 60.0 | 3.71e-01 | 94.4% | 56.9% | |
| 3096910 | 2003.1.2.63 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N, GMC_oxred_C, NAD_binding_8 | 0.70 | 59.0 | 3.41e-01 | 94.4% | 51.5% |
| 4307735 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.68 | 58.0 | 3.52e-01 | 96.3% | 69.1% |
| 1168367 | 11.1.5.48 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Big_8 | 0.68 | 48.0 | 3.40e-01 | 74.1% | 64.8% |
| 3174528 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.68 | 56.0 | 3.38e-01 | 94.4% | 46.2% |
| 3087997 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.68 | 57.0 | 3.30e-01 | 94.4% | 51.4% |
| 4113274 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 53.0 | 4.78e-01 | 85.2% | 89.3% |
| 3713034 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 51.0 | 3.03e-01 | 81.5% | 16.8% |
| 4162406 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.68 | 56.0 | 3.27e-01 | 94.4% | 38.2% |
| 4537309 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.67 | 49.0 | 4.09e-01 | 81.5% | 44.2% |
| 3530591 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.67 | 57.0 | 4.39e-01 | 96.3% | 48.8% |
| 1619062 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.66 | 55.0 | 3.39e-01 | 94.4% | 84.9% |
| 3389055 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.65 | 47.0 | 4.26e-01 | 75.9% | 64.0% |
| 5051148 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 52.0 | 5.09e-01 | 92.6% | 81.7% |
| 5011086 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.64 | 52.0 | 4.42e-01 | 90.7% | 87.8% |
| 5051419 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 50.0 | 4.99e-01 | 92.6% | 87.3% |
| 3817060 | 109.4.1.1794 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.62 | 55.0 | 3.17e-01 | 100.0% | 11.8% |
| 1019410 | 2.1.1.56 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3299 | 0.62 | 46.0 | 3.52e-01 | 85.2% | 97.3% |
| 3360888 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.62 | 55.0 | 3.18e-01 | 100.0% | 11.7% |
| 3428387 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.62 | 44.0 | 3.16e-01 | 79.6% | 43.9% |
| 3416287 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 47.0 | 3.65e-01 | 90.7% | 70.3% |
| 3716765 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.58 | 50.0 | 2.89e-01 | 100.0% | 79.7% |
| 91487 | 389.1.1.15 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_MSP1_1 | 0.58 | 34.0 | 3.65e-01 | 83.3% | 68.9% |
| 2549340 | 3735.1.1.5 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TTc_toxin_rep | 0.56 | 47.0 | 2.69e-01 | 100.0% | 40.3% |
| 1512998 | 3953.1.1.1 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N | 0.56 | 47.0 | 4.14e-01 | 100.0% | 85.9% |
| 4965514 | 2008.1.1.227 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5784 | 0.54 | 41.0 | 2.83e-01 | 85.2% | 54.0% |
| 4298074 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.54 | 42.0 | 3.17e-01 | 96.3% | 80.6% |
| 4057793 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.53 | 40.0 | 3.06e-01 | 92.6% | 91.5% |
| 3283730 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.52 | 42.0 | 3.81e-01 | 100.0% | 88.2% |
| 3416046 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.51 | 35.0 | 2.95e-01 | 75.9% | 73.6% |
D2
high
residues 67-202
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18822.8 best | CdvA | 140.9 | 4.20e-41 | 100.0% | 90.5% |
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.90 | 68.0 | 5.68e-01 | 77.2% | 71.6% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.90 | 56.0 | 6.38e-01 | 72.8% | 80.4% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.90 | 67.0 | 5.40e-01 | 76.5% | 44.7% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 60.0 | 6.91e-01 | 100.0% | 91.2% |
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.88 | 66.0 | 6.40e-01 | 77.9% | 72.8% |
| 6h2dS01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.87 | 80.0 | 6.62e-01 | 96.3% | 70.9% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.87 | 64.0 | 5.20e-01 | 75.7% | 44.9% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 60.0 | 6.39e-01 | 100.0% | 79.5% |
| 1quuA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 58.0 | 6.10e-01 | 100.0% | 74.6% |
| 5y06A01 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.86 | 61.0 | 4.99e-01 | 72.8% | 63.8% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.85 | 64.0 | 4.77e-01 | 77.9% | 41.7% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.84 | 79.0 | 5.85e-01 | 100.0% | 76.3% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.84 | 61.0 | 5.14e-01 | 74.3% | 97.2% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.83 | 51.0 | 5.98e-01 | 100.0% | 85.7% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 57.0 | 5.05e-01 | 100.0% | 51.0% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.81 | 62.0 | 5.81e-01 | 78.7% | 72.0% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.81 | 64.0 | 5.92e-01 | 100.0% | 67.1% |
| 1qu7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.81 | 60.0 | 5.00e-01 | 77.2% | 53.3% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.80 | 50.0 | 5.57e-01 | 70.6% | 79.2% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 68.0 | 6.21e-01 | 100.0% | 70.5% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.80 | 55.0 | 4.29e-01 | 72.1% | 35.4% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 59.0 | 5.63e-01 | 77.2% | 68.6% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.79 | 58.0 | 5.14e-01 | 75.0% | 54.3% |
| 4cgkA01 | 6.10.250.3150 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.79 | 60.0 | 5.09e-01 | 78.7% | 55.1% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.79 | 53.0 | 5.68e-01 | 100.0% | 78.2% |
| 2b0hA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.79 | 47.0 | 4.86e-01 | 100.0% | 62.5% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.79 | 56.0 | 4.80e-01 | 72.8% | 48.6% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.79 | 55.0 | 6.31e-01 | 75.0% | 95.0% |
| 5azpB01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.79 | 65.0 | 4.65e-01 | 86.8% | 37.9% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.77 | 39.0 | 4.18e-01 | 86.0% | 55.9% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 55.0 | 4.38e-01 | 75.7% | 37.8% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.75 | 65.0 | 4.37e-01 | 91.2% | 88.3% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.75 | 59.0 | 4.79e-01 | 81.6% | 46.3% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.75 | 41.0 | 4.00e-01 | 100.0% | 49.0% |
| 2qvaA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.74 | 45.0 | 4.68e-01 | 100.0% | 63.6% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 56.0 | 5.30e-01 | 78.7% | 67.7% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.73 | 56.0 | 5.00e-01 | 100.0% | 56.8% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.73 | 54.0 | 4.61e-01 | 76.5% | 63.1% |
| 1yc9A01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.73 | 59.0 | 4.40e-01 | 85.3% | 41.3% |
| 5azsC01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.72 | 60.0 | 4.38e-01 | 88.2% | 87.4% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 56.0 | 4.39e-01 | 86.8% | 41.7% |
| 4k7rA01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.71 | 57.0 | 4.26e-01 | 86.8% | 40.2% |
| 3zdqA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.71 | 56.0 | 4.13e-01 | 83.1% | 33.6% |
| 8iprA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.70 | 57.0 | 4.38e-01 | 89.0% | 38.6% |
| 4ke2A00 | 6.10.140.1860 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 48.0 | 4.21e-01 | 71.3% | 49.0% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.69 | 40.0 | 4.12e-01 | 100.0% | 58.6% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.67 | 52.0 | 5.34e-01 | 99.3% | 83.5% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.67 | 38.0 | 4.16e-01 | 98.5% | 66.7% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.66 | 40.0 | 4.83e-01 | 86.8% | 95.3% |
| 4dylA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 54.0 | 4.40e-01 | 87.5% | 72.0% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 61.0 | 5.09e-01 | 100.0% | 77.0% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 58.0 | 5.40e-01 | 96.3% | 82.1% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.64 | 58.0 | 5.13e-01 | 93.4% | 99.5% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.64 | 45.0 | 4.85e-01 | 97.1% | 83.8% |
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.64 | 56.0 | 4.17e-01 | 94.1% | 81.2% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.62 | 52.0 | 3.95e-01 | 89.7% | 38.1% |
| 4q4hB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.60 | 55.0 | 4.11e-01 | 99.3% | 79.3% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.59 | 41.0 | 4.56e-01 | 100.0% | 89.0% |
| 5dqqA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.59 | 39.0 | 4.09e-01 | 100.0% | 71.1% |
| 8ipqB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.59 | 52.0 | 4.05e-01 | 95.6% | 90.7% |
| 2wdqC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.54 | 35.0 | 3.70e-01 | 95.6% | 72.7% |
| 1jadA00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.52 | 43.0 | 3.58e-01 | 89.0% | 75.6% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4978213 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.94 | 80.0 | 8.55e-01 | 86.8% | 98.3% |
| 5032512 | 5086.1.1.234 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › CdvA | 0.92 | 88.0 | 8.89e-01 | 99.3% | 100.0% |
| 3251434 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.91 | 69.0 | 6.16e-01 | 77.9% | 78.9% |
| 3843224 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.90 | 68.0 | 5.48e-01 | 77.9% | 75.8% |
| 4927671 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.90 | 68.0 | 5.59e-01 | 77.9% | 88.9% |
| 4097174 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.90 | 67.0 | 4.20e-01 | 77.2% | 19.8% |
| 5010596 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.89 | 68.0 | 5.59e-01 | 77.9% | 48.6% |
| 4193109 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.88 | 67.0 | 3.88e-01 | 77.2% | 12.8% |
| 5052377 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.88 | 81.0 | 6.82e-01 | 96.3% | 90.5% |
| 3704105 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.88 | 65.0 | 6.13e-01 | 76.5% | 87.5% |
| 5007124 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 66.0 | 4.97e-01 | 77.2% | 39.7% |
| 5082020 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.87 | 66.0 | 4.70e-01 | 77.9% | 83.6% |
| 3377464 | 3755.3.1.285 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › NET2A | 0.87 | 60.0 | 5.63e-01 | 72.1% | 59.4% |
| 4136919 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.86 | 65.0 | 5.81e-01 | 77.9% | 57.8% |
| 3739544 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.86 | 64.0 | 3.94e-01 | 75.7% | 16.1% |
| 4523639 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.86 | 62.0 | 5.42e-01 | 75.7% | 52.6% |
| 3962991 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.86 | 64.0 | 5.56e-01 | 76.5% | 54.9% |
| 4036645 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.86 | 62.0 | 5.41e-01 | 76.5% | 51.8% |
| 4955963 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.86 | 68.0 | 5.87e-01 | 82.4% | 91.5% |
| 3699468 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 64.0 | 5.52e-01 | 77.2% | 68.5% |
| 3920125 | 3755.3.1.450 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Uso1_p115_C | 0.85 | 64.0 | 5.57e-01 | 77.2% | 55.4% |
| 3936511 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 64.0 | 4.31e-01 | 77.2% | 32.0% |
| 3949412 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 63.0 | 5.63e-01 | 76.5% | 77.8% |
| 5047670 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.85 | 61.0 | 5.13e-01 | 73.5% | 95.8% |
| 5056871 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.85 | 63.0 | 4.71e-01 | 76.5% | 84.8% |
| 4977912 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 71.0 | 6.34e-01 | 86.8% | 98.9% |
| 3973695 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.85 | 61.0 | 5.40e-01 | 75.7% | 53.2% |
| 3482286 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.84 | 62.0 | 5.37e-01 | 75.7% | 79.0% |
| 5033885 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.84 | 63.0 | 5.36e-01 | 76.5% | 79.5% |
| 3973283 | 325.1.7.27 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › HH_AprE | 0.84 | 61.0 | 5.31e-01 | 75.7% | 51.8% |
| 4324117 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.84 | 64.0 | 4.61e-01 | 78.7% | 31.1% |
| 5056869 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.84 | 63.0 | 5.76e-01 | 77.9% | 92.6% |
| 4984240 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.84 | 63.0 | 4.05e-01 | 77.9% | 21.1% |
| 3702347 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.83 | 63.0 | 5.75e-01 | 77.9% | 80.0% |
| 4977416 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.83 | 64.0 | 5.16e-01 | 78.7% | 50.2% |
| 3715936 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.83 | 62.0 | 5.63e-01 | 76.5% | 81.7% |
| 4392204 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.83 | 63.0 | 5.24e-01 | 77.9% | 56.8% |
| 3737266 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.83 | 61.0 | 4.36e-01 | 76.5% | 30.7% |
| 3215140 | 3939.1.1.190 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › KIF21A_4th | 0.83 | 63.0 | 5.86e-01 | 78.7% | 67.3% |
| 3927012 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.83 | 56.0 | 5.54e-01 | 100.0% | 66.4% |
| 5039743 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.83 | 61.0 | 5.71e-01 | 76.5% | 99.4% |
| 4629385 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.82 | 62.0 | 6.03e-01 | 77.9% | 72.0% |
| 3968781 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.82 | 62.0 | 6.13e-01 | 78.7% | 73.8% |
| 3675423 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 60.0 | 5.69e-01 | 75.7% | 98.1% |
| 3880244 | 603.2.1.24 ↗ | alpha bundles › STAT-like › STAT › STAT › TBCA_PH | 0.82 | 74.0 | 7.04e-01 | 95.6% | 87.7% |
| 4937739 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 61.0 | 6.19e-01 | 77.2% | 80.0% |
| 4931937 | 3755.4.1.66 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › MCPsignal | 0.82 | 62.0 | 4.49e-01 | 77.9% | 57.3% |
| 3964486 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.81 | 62.0 | 5.82e-01 | 78.7% | 66.9% |
| 3852268 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 61.0 | 5.75e-01 | 77.9% | 69.3% |
| 4086306 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.81 | 62.0 | 5.13e-01 | 78.7% | 52.4% |
| 5066039 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.81 | 58.0 | 3.83e-01 | 77.9% | 20.2% |
| 3520603 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.81 | 65.0 | 4.03e-01 | 82.4% | 24.0% |
| 3731612 | 2004.1.1.567 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 | 0.80 | 60.0 | 3.71e-01 | 77.9% | 14.5% |
| 3620978 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.80 | 62.0 | 4.61e-01 | 80.1% | 45.3% |
| 4001189 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.80 | 61.0 | 4.12e-01 | 78.7% | 26.2% |
| 3601853 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.80 | 71.0 | 6.93e-01 | 100.0% | 88.3% |
| 3598168 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.79 | 60.0 | 5.64e-01 | 78.7% | 92.7% |
| 3294656 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.79 | 59.0 | 4.24e-01 | 77.9% | 29.4% |
| 3921802 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.79 | 59.0 | 5.48e-01 | 77.2% | 88.5% |
| 4645599 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.79 | 59.0 | 4.32e-01 | 78.7% | 30.1% |
| 3935064 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 58.0 | 4.44e-01 | 76.5% | 36.9% |
| 2967092 | 192.29.1.298 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF30778 | 0.78 | 44.0 | 4.53e-01 | 94.9% | 58.3% |
| 4428739 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 64.0 | 5.02e-01 | 85.3% | 80.8% |
| 5070736 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 60.0 | 5.22e-01 | 80.1% | 56.0% |
| 3647975 | 3684.1.1.33 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF7795 | 0.78 | 71.0 | 6.59e-01 | 100.0% | 78.2% |
| 3965792 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.78 | 57.0 | 4.41e-01 | 75.0% | 91.3% |
| 5047075 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.78 | 61.0 | 4.49e-01 | 82.4% | 85.3% |
| 4267909 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 57.0 | 5.06e-01 | 77.2% | 54.9% |
| 3958574 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.77 | 58.0 | 5.43e-01 | 90.4% | 64.8% |
| 3263540 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 58.0 | 3.98e-01 | 78.7% | 62.0% |
| 3969687 | 3755.3.1.461 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › MksF | 0.75 | 57.0 | 4.55e-01 | 78.7% | 41.5% |
| 3537261 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 55.0 | 4.26e-01 | 75.0% | 36.4% |
| 4228031 | 109.4.1.128 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G_like_2 | 0.75 | 62.0 | 4.75e-01 | 100.0% | 41.0% |
| 3919840 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.74 | 54.0 | 4.59e-01 | 75.7% | 50.9% |
| 5030599 | 192.15.1.226 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CdvA | 0.73 | 64.0 | 6.60e-01 | 94.1% | 99.2% |
| 3165089 | 5086.1.1.190 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › OEP | 0.73 | 59.0 | 4.97e-01 | 85.3% | 69.1% |
| 4175809 | 5086.1.1.88 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_CyaD | 0.72 | 54.0 | 5.12e-01 | 78.7% | 84.2% |
| 4934678 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.71 | 66.0 | 5.98e-01 | 100.0% | 75.6% |
| 3176663 | 603.1.1.207 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF30350 | 0.71 | 48.0 | 4.94e-01 | 100.0% | 72.3% |
| 5036796 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.71 | 48.0 | 4.84e-01 | 100.0% | 67.9% |
| 4934439 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.71 | 53.0 | 3.65e-01 | 78.7% | 24.6% |
| 5070735 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 51.0 | 4.70e-01 | 76.5% | 99.4% |
| 3933806 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.69 | 42.0 | 4.33e-01 | 100.0% | 63.8% |
| 4028815 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.68 | 55.0 | 3.96e-01 | 86.0% | 30.9% |
| 4478840 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.67 | 54.0 | 4.05e-01 | 86.0% | 35.5% |
| 3285828 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.67 | 54.0 | 4.06e-01 | 86.8% | 36.0% |
| 4001533 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.66 | 54.0 | 4.50e-01 | 86.0% | 50.9% |
| 3987540 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.65 | 52.0 | 4.02e-01 | 86.0% | 37.1% |
| 3990679 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.65 | 53.0 | 4.37e-01 | 88.2% | 47.6% |
| 3404132 | 3755.2.1.0 ↗ | alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein | 0.65 | 52.0 | 4.58e-01 | 84.6% | 80.5% |
| 4821107 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.62 | 55.0 | 4.15e-01 | 96.3% | 83.1% |
| 5080570 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 49.0 | 4.98e-01 | 84.6% | 94.0% |