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IMGVR_UViG_3300006346_000021-3300006346-Ga0099696_10813476
Arc-VirIMGVR_UViG_3300006346_000021-3300006346-Ga0099696_10813476
Identity
- Kingdom:
- archaea
Quality
85.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-54
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f5cA04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.64 | 55.0 | 3.41e-01 | 100.0% | 21.1% |
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.56 | 47.0 | 4.26e-01 | 100.0% | 98.7% |
| 1w3bB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 47.0 | 2.89e-01 | 100.0% | 15.5% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.52 | 41.0 | 3.35e-01 | 96.3% | 78.6% |
D2
medium
residues 57-107
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xqnT01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.81 | 55.0 | 5.09e-01 | 98.0% | 58.1% |
| 1x6aA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.74 | 51.0 | 4.80e-01 | 98.0% | 59.7% |
| 3t7lA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.73 | 56.0 | 4.97e-01 | 98.0% | 58.1% |
| 1z2qA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 54.0 | 4.63e-01 | 100.0% | 54.8% |
| 1wfkA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 51.0 | 4.49e-01 | 96.1% | 55.8% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 50.0 | 4.22e-01 | 98.0% | 51.2% |
| 1x4uA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 51.0 | 4.70e-01 | 98.0% | 73.9% |
| 4kfzA02 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.58 | 50.0 | 4.66e-01 | 98.0% | 81.5% |
| 2iybE00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.57 | 50.0 | 4.64e-01 | 100.0% | 87.5% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 49.0 | 4.57e-01 | 100.0% | 86.4% |
| 5y20A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 50.0 | 4.97e-01 | 100.0% | 98.1% |
| 2xb1A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 48.0 | 3.95e-01 | 100.0% | 74.0% |
| 1x62A01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.53 | 46.0 | 4.42e-01 | 100.0% | 86.7% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3918878 | 386.1.1.247 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › LIM | 0.92 | 61.0 | 6.45e-01 | 98.0% | 77.8% |
| 3996748 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.90 | 60.0 | 5.82e-01 | 98.0% | 63.6% |
| 3578137 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.90 | 52.0 | 6.35e-01 | 88.2% | 100.0% |
| 3890996 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.89 | 52.0 | 6.33e-01 | 88.2% | 100.0% |
| 3479199 | 376.1.1.52 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM | 0.88 | 57.0 | 5.10e-01 | 94.1% | 50.0% |
| 3493898 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.88 | 48.0 | 5.96e-01 | 84.3% | 93.3% |
| 3718397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.86 | 57.0 | 6.72e-01 | 94.1% | 100.0% |
| 3206107 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.85 | 55.0 | 6.38e-01 | 96.1% | 97.1% |
| 3235837 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.85 | 59.0 | 5.99e-01 | 100.0% | 74.0% |
| 3493899 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.84 | 56.0 | 6.46e-01 | 98.0% | 100.0% |
| 3201162 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.84 | 58.0 | 5.02e-01 | 98.0% | 49.3% |
| 3538293 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.83 | 55.0 | 6.35e-01 | 98.0% | 100.0% |
| 3477888 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.83 | 47.0 | 5.67e-01 | 84.3% | 96.7% |
| 3507148 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.82 | 54.0 | 5.14e-01 | 96.1% | 58.3% |
| 3571847 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.82 | 46.0 | 5.42e-01 | 84.3% | 93.3% |
| 958652 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.81 | 51.0 | 6.05e-01 | 98.0% | 100.0% |
| 3797387 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.81 | 59.0 | 6.20e-01 | 100.0% | 86.7% |
| 3742454 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.81 | 53.0 | 6.05e-01 | 98.0% | 100.0% |
| 3508988 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.80 | 53.0 | 6.00e-01 | 94.1% | 100.0% |
| 3559364 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.80 | 53.0 | 6.18e-01 | 96.1% | 100.0% |
| 4099817 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.80 | 53.0 | 6.00e-01 | 94.1% | 100.0% |
| 3477082 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.79 | 53.0 | 6.01e-01 | 98.0% | 100.0% |
| 3554324 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 44.0 | 5.19e-01 | 84.3% | 93.3% |
| 3395083 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.77 | 51.0 | 5.86e-01 | 94.1% | 100.0% |
| 3678392 | 377.1.1.33 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FLZ | 0.77 | 49.0 | 5.73e-01 | 96.1% | 97.1% |
| 3273422 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.77 | 51.0 | 5.81e-01 | 98.0% | 100.0% |
| 3908141 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.77 | 44.0 | 5.09e-01 | 84.3% | 93.3% |
| 3673150 | 377.1.1.33 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FLZ | 0.76 | 49.0 | 5.49e-01 | 96.1% | 87.2% |
| 4547414 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.74 | 57.0 | 6.01e-01 | 100.0% | 93.3% |
| 5071881 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.73 | 53.0 | 5.05e-01 | 100.0% | 66.7% |
| 3272697 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 51.0 | 5.64e-01 | 98.0% | 97.5% |
| 3493565 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.71 | 55.0 | 5.00e-01 | 100.0% | 62.9% |
| 3211439 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 41.0 | 4.67e-01 | 84.3% | 96.7% |
| 3815866 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.70 | 55.0 | 5.23e-01 | 96.1% | 73.3% |
| 3599415 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.69 | 53.0 | 4.81e-01 | 98.0% | 61.4% |
| 3592438 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.69 | 53.0 | 4.19e-01 | 100.0% | 42.0% |
| 3219660 | 376.1.1.96 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ_ADA2 | 0.69 | 54.0 | 5.48e-01 | 100.0% | 86.0% |
| 3739083 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.68 | 55.0 | 4.92e-01 | 100.0% | 62.7% |
| 3907189 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.68 | 55.0 | 4.55e-01 | 100.0% | 49.5% |
| 3598564 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 46.0 | 4.57e-01 | 100.0% | 67.3% |
| 3224439 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.68 | 58.0 | 4.72e-01 | 100.0% | 51.6% |
| 3701012 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.67 | 52.0 | 4.76e-01 | 96.1% | 62.9% |
| 3597323 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.67 | 52.0 | 4.63e-01 | 100.0% | 58.7% |
| 3593722 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.67 | 52.0 | 5.00e-01 | 96.1% | 73.3% |
| 5019399 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.66 | 61.0 | 5.92e-01 | 100.0% | 94.5% |
| 3865964 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.66 | 55.0 | 4.49e-01 | 100.0% | 50.5% |
| 3607253 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.65 | 57.0 | 4.78e-01 | 98.0% | 58.8% |
| 3715785 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.64 | 57.0 | 4.90e-01 | 100.0% | 65.8% |
| 3928425 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.64 | 55.0 | 4.67e-01 | 100.0% | 58.8% |
| 3171356 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.63 | 54.0 | 4.61e-01 | 98.0% | 70.6% |
| 3176507 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.63 | 51.0 | 4.43e-01 | 90.2% | 62.5% |
| 3309565 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.61 | 54.0 | 4.65e-01 | 100.0% | 67.5% |
| 4359679 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.61 | 53.0 | 4.79e-01 | 100.0% | 77.1% |
| 3547416 | 376.1.3.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_CARP1-2 | 0.59 | 49.0 | 4.80e-01 | 100.0% | 85.5% |
| 3706704 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.59 | 49.0 | 4.18e-01 | 100.0% | 56.5% |
| 3481280 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.58 | 51.0 | 4.90e-01 | 100.0% | 90.0% |
| 3506139 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.57 | 48.0 | 4.03e-01 | 100.0% | 53.3% |
| 3233467 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.57 | 51.0 | 4.98e-01 | 100.0% | 96.4% |
| 3929915 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.57 | 50.0 | 4.93e-01 | 100.0% | 98.2% |
| 3790267 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 48.0 | 4.28e-01 | 100.0% | 82.7% |
| 3373774 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.56 | 41.0 | 3.74e-01 | 100.0% | 58.6% |
| 3592678 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 43.0 | 2.96e-01 | 92.2% | 37.7% |
| 3197202 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.55 | 41.0 | 3.02e-01 | 82.4% | 95.2% |
| 3463525 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.54 | 41.0 | 4.09e-01 | 100.0% | 80.0% |
| 3717537 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.54 | 44.0 | 4.31e-01 | 100.0% | 87.3% |