←Back to structures
IMGVR_UViG_3300006482_000005-3300006482-Ga0100242_1080756
Arc-VirIMGVR_UViG_3300006482_000005-3300006482-Ga0100242_1080756
Identity
- Kingdom:
- archaea
Quality
69.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-71
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.85 | 45.0 | 5.78e-01 | 72.1% | 94.1% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.84 | 48.0 | 5.90e-01 | 72.1% | 89.7% |
| 1wjpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.77 | 40.0 | 5.26e-01 | 70.5% | 100.0% |
| 2d9hA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.68 | 53.0 | 4.85e-01 | 83.6% | 78.2% |
| 7r0kA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.60 | 42.0 | 3.09e-01 | 73.8% | 42.2% |
| 2vrdA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.57 | 38.0 | 3.83e-01 | 95.1% | 68.9% |
| 3v43A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 40.0 | 3.31e-01 | 77.0% | 60.7% |
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.55 | 37.0 | 2.75e-01 | 88.5% | 25.3% |
| 2ewlA00 | 3.30.160.330 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 38.0 | 4.01e-01 | 86.9% | 80.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3398989 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.85 | 52.0 | 4.40e-01 | 73.8% | 40.0% |
| 3658440 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.85 | 51.0 | 5.43e-01 | 78.7% | 69.1% |
| 3172559 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.84 | 49.0 | 6.00e-01 | 72.1% | 94.7% |
| 4286254 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.83 | 50.0 | 3.84e-01 | 73.8% | 28.9% |
| 3479594 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.79 | 49.0 | 5.13e-01 | 72.1% | 69.1% |
| 3828070 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.78 | 52.0 | 5.44e-01 | 72.1% | 76.4% |
| 3493703 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.74 | 49.0 | 5.60e-01 | 86.9% | 93.3% |
| 3426675 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.71 | 52.0 | 5.27e-01 | 91.8% | 79.7% |
| 3485009 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.70 | 49.0 | 4.70e-01 | 73.8% | 84.3% |
| 3656728 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.68 | 43.0 | 4.39e-01 | 88.5% | 66.1% |
| 3734111 | 386.1.1.265 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7066 | 0.68 | 50.0 | 5.34e-01 | 100.0% | 90.6% |
| 3654927 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.66 | 49.0 | 4.25e-01 | 77.0% | 67.8% |
| 3347344 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.66 | 48.0 | 4.69e-01 | 85.2% | 70.8% |
| 3505284 | 386.1.1.19 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_2 | 0.64 | 45.0 | 3.75e-01 | 73.8% | 81.0% |
| 3910228 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.63 | 43.0 | 3.53e-01 | 72.1% | 70.9% |
| 3751681 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.63 | 43.0 | 4.67e-01 | 88.5% | 86.0% |
| 3316158 | 396.1.1.0 ↗ | few secondary structure elements › CCHC-type 1 zinc finger › Retrovirus zinc finger-related domains › Retrovirus zinc finger-related domains | 0.62 | 36.0 | 4.26e-01 | 73.8% | 100.0% |
| 4001869 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 52.0 | 3.71e-01 | 91.8% | 98.2% |
| 3930705 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.51 | 40.0 | 3.37e-01 | 83.6% | 54.0% |
| 3401528 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 46.0 | 3.98e-01 | 98.4% | 78.9% |