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IMGVR_UViG_3300006593_000283-3300006593-Ga0079081_10037797

Arc-Vir

IMGVR_UViG_3300006593_000283-3300006593-Ga0079081_10037797

Identity

Kingdom:
archaea

Quality

77.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-64
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 43.0 4.37e-01 96.7% 74.6%
3qr8A01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.60 41.0 3.77e-01 73.3% 82.1%
3mzkB01 6.20.50.30 Special › Other non-globular › N-terminal domain of TfIIb › 0.55 30.0 3.58e-01 81.7% 84.2%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 37.0 3.55e-01 100.0% 62.0%
2k4nA00 3.30.720.70 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.53 44.0 3.63e-01 93.3% 63.1%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 37.0 3.64e-01 76.7% 87.5%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.51 37.0 3.19e-01 78.3% 94.1%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 33.0 3.37e-01 93.3% 69.6%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 35.0 3.46e-01 93.3% 65.7%
4pz7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 2.89e-01 78.3% 61.3%
1rjbA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 39.0 3.17e-01 86.7% 97.5%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3592766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 73.0 5.47e-01 100.0% 86.4%
3271441 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.79 62.0 6.44e-01 90.0% 92.7%
3469045 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.78 68.0 6.32e-01 96.7% 88.0%
3699520 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.78 55.0 5.97e-01 76.7% 90.0%
3673072 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.73 65.0 6.40e-01 98.3% 90.8%
3790956 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.73 58.0 5.57e-01 96.7% 75.4%
3432823 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.73 60.0 4.99e-01 91.7% 68.6%
3779808 376.1.2.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 0.73 60.0 5.88e-01 95.0% 83.1%
3825395 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.68 53.0 5.15e-01 93.3% 77.1%
3582235 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.66 56.0 5.62e-01 98.3% 93.3%
3228213 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.63 42.0 4.10e-01 95.0% 63.1%
3940607 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 42.0 4.25e-01 95.0% 69.5%
3591224 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 39.0 4.22e-01 93.3% 76.0%
3790904 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.60 40.0 4.03e-01 95.0% 68.3%
3546306 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.59 37.0 3.23e-01 88.3% 40.0%
4049072 2.4.1.6 ↗ beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.58 39.0 3.26e-01 70.0% 99.1%
3250994 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 40.0 3.95e-01 75.0% 100.0%
3197197 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.56 47.0 3.99e-01 95.0% 74.3%
3703749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 3.77e-01 95.0% 66.2%
4633023 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.56 40.0 3.18e-01 78.3% 100.0%
3255969 2004.1.1.174 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Elong_Iki1 0.55 41.0 2.64e-01 90.0% 17.2%
4936173 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.55 38.0 3.07e-01 73.3% 100.0%
4951352 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 38.0 3.06e-01 100.0% 36.7%
4311788 2.4.1.12 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.54 37.0 3.14e-01 75.0% 99.1%
3931602 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.54 34.0 3.30e-01 88.3% 54.3%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 35.0 3.67e-01 91.7% 74.5%
119159 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.54 37.0 3.67e-01 100.0% 68.8%
3540524 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 38.0 3.55e-01 78.3% 83.7%
4943610 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 37.0 3.03e-01 75.0% 100.0%
4443040 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 38.0 3.23e-01 100.0% 44.2%
184717 4272.2.1.1 ↗ a+b two layers › Nqo5-like › Protein PF0246 › Protein PF0246 › DUF5748 0.53 44.0 3.63e-01 93.3% 63.1%
3615126 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 3.04e-01 86.7% 37.6%
5055361 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.50 36.0 2.45e-01 76.7% 75.6%