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IMGVR_UViG_3300006596_000440-3300006596-Ga0079074_10046044

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300006596_000440-3300006596-Ga0079074_10046044 ↗
Kingdom:: archaea

Quality

62.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-91

PDB

Domain cluster: representative

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2lefA00	1.10.30.10	Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain	0.74	58.0	4.84e-01	86.0%	69.8%
6h7bA01	1.10.1900.10	Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein	0.72	57.0	5.02e-01	88.0%	75.7%
2kp8A00	1.20.5.170	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.70	56.0	4.92e-01	86.0%	59.7%
1s4kA00	1.10.3100.10	Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein	0.70	61.0	4.63e-01	100.0%	60.0%
1oj6A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.68	51.0	3.61e-01	92.0%	27.2%
3geeA02	1.20.120.430	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2	0.68	52.0	3.59e-01	84.0%	25.6%
5zr4A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.66	53.0	4.17e-01	88.0%	54.9%
4griA05	1.10.10.350	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.65	48.0	3.98e-01	84.0%	77.3%
2debB02	3.30.559.10	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain	0.63	56.0	3.45e-01	98.0%	28.3%
3fz5B00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.60	49.0	3.39e-01	94.0%	44.3%
1ifwA00	1.10.1900.10	Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein	0.59	45.0	3.78e-01	86.0%	59.8%
2qm3A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.59	40.0	3.38e-01	70.0%	73.5%
1nv8B01	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.59	47.0	4.19e-01	88.0%	88.7%
1fcqA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.58	51.0	3.12e-01	100.0%	15.9%
2n80A00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.56	45.0	3.77e-01	94.0%	74.5%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3623106	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.87	65.0	3.79e-01	78.0%	85.5%
5062184	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.62	36.0	3.43e-01	82.0%	48.3%
2430	143.1.1.1 ↗	alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain › PABP	0.59	45.0	3.78e-01	86.0%	59.8%
3545485	110.1.1.0 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain	0.59	46.0	3.58e-01	86.0%	70.9%
3873232	110.1.1.0 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain	0.56	43.0	3.66e-01	82.0%	52.5%
4544247	132.3.1.1 ↗	alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD	0.55	38.0	3.65e-01	74.0%	96.7%
5060354	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	37.0	3.46e-01	78.0%	83.1%
4945141	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.51	35.0	3.41e-01	72.0%	65.5%