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IMGVR_UViG_3300006597_000275-3300006597-Ga0079070_10274914
Arc-VirIMGVR_UViG_3300006597_000275-3300006597-Ga0079070_10274914
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-60
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wp3C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.63 | 55.0 | 3.90e-01 | 100.0% | 46.0% |
| 3oi8A01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.59 | 42.0 | 3.65e-01 | 98.3% | 48.4% |
| 1zfjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 40.0 | 2.44e-01 | 75.9% | 86.8% |
| 7ahhC02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.57 | 36.0 | 3.08e-01 | 89.7% | 34.3% |
| 2fl4A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 44.0 | 3.64e-01 | 82.8% | 68.3% |
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 43.0 | 3.15e-01 | 84.5% | 41.2% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 42.0 | 3.79e-01 | 82.8% | 76.8% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.54 | 41.0 | 3.81e-01 | 82.8% | 93.2% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 44.0 | 3.18e-01 | 91.4% | 44.3% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 4.13e-01 | 93.1% | 72.0% |
| 1vr9A01 | 3.90.1280.20 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › | 0.54 | 40.0 | 3.93e-01 | 96.6% | 75.0% |
| 2w00A02 | 3.90.640.50 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.53 | 44.0 | 4.14e-01 | 94.8% | 93.2% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 42.0 | 2.86e-01 | 89.7% | 24.7% |
| 2af6A01 | 3.30.70.3180 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 2.75e-01 | 70.7% | 33.6% |
| 1nv8A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 3.00e-01 | 94.8% | 28.4% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.64e-01 | 98.3% | 67.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3228509 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.71 | 50.0 | 3.77e-01 | 74.1% | 63.7% |
| 4606139 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 47.0 | 4.27e-01 | 74.1% | 97.5% |
| 4379259 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.66 | 56.0 | 4.67e-01 | 100.0% | 89.9% |
| 3598488 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.64 | 54.0 | 4.06e-01 | 100.0% | 85.4% |
| 6912 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.63 | 42.0 | 3.59e-01 | 100.0% | 41.0% |
| 360695 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.63 | 42.0 | 3.62e-01 | 100.0% | 42.7% |
| 3591785 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.62 | 51.0 | 3.84e-01 | 93.1% | 72.7% |
| 5009701 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.61 | 35.0 | 3.30e-01 | 77.6% | 47.1% |
| 1087109 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.60 | 37.0 | 3.82e-01 | 89.7% | 62.5% |
| 3706910 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 49.0 | 3.56e-01 | 100.0% | 84.5% |
| 3958434 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.60 | 37.0 | 3.60e-01 | 89.7% | 54.7% |
| 3174392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 42.0 | 3.78e-01 | 75.9% | 95.0% |
| 3270568 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.58 | 49.0 | 3.12e-01 | 98.3% | 37.1% |
| 3754268 | 327.19.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › Mlh1_C | 0.58 | 45.0 | 3.84e-01 | 87.9% | 86.0% |
| 4953987 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.57 | 46.0 | 3.42e-01 | 87.9% | 62.1% |
| 5083459 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.56 | 41.0 | 3.15e-01 | 79.3% | 45.2% |
| 3484630 | 101.1.2.69 ↗ | alpha arrays › HTH › HTH › winged helix domain › La | 0.56 | 40.0 | 3.04e-01 | 77.6% | 70.3% |
| 4399101 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.55 | 40.0 | 3.31e-01 | 79.3% | 86.4% |
| 1761609 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.55 | 40.0 | 3.90e-01 | 86.2% | 69.1% |
| 4322135 | 101.1.2.39 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA | 0.54 | 41.0 | 3.89e-01 | 98.3% | 67.1% |
| 3788879 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.54 | 44.0 | 2.67e-01 | 93.1% | 33.1% |
| 4651301 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.53 | 40.0 | 3.31e-01 | 84.5% | 80.9% |
| 4999954 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.53 | 40.0 | 3.06e-01 | 82.8% | 43.6% |
| 3273255 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.53 | 39.0 | 2.72e-01 | 79.3% | 95.5% |
| 5065249 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 3.60e-01 | 82.8% | 69.4% |
| None | — | 0.53 | 43.0 | 3.22e-01 | 91.4% | 84.7% | |
| 3364438 | 101.1.2.75 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIF_alpha | 0.53 | 37.0 | 3.60e-01 | 98.3% | 66.2% |
| 5060478 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 41.0 | 3.21e-01 | 98.3% | 91.3% |
| 5072417 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 3.02e-01 | 98.3% | 39.2% |
| 5008618 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.50 | 41.0 | 3.10e-01 | 91.4% | 60.7% |