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IMGVR_UViG_3300006615_000253-3300006615-Ga0101438_1062588

Arc-Vir

IMGVR_UViG_3300006615_000253-3300006615-Ga0101438_1062588

Identity

Kingdom:
archaea

Quality

54.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 52-178
PDB
D2 high residues 183-289
PDB
Domain cluster: rep: IMGVR_UViG_3300017910_001187-3300017910-Ga0192369_10652626__D362-481
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 48.0 3.33e-01 93.5% 95.2%
8axiA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 45.0 3.17e-01 86.0% 59.3%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 43.0 3.04e-01 82.2% 100.0%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 34.0 4.06e-01 86.9% 98.5%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 46.0 3.41e-01 94.4% 100.0%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 48.0 4.79e-01 98.1% 100.0%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 45.0 3.16e-01 91.6% 81.0%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 47.0 4.47e-01 98.1% 96.9%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.54 41.0 4.08e-01 80.4% 84.4%
3ltiA01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.53 41.0 3.58e-01 83.2% 69.7%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 45.0 4.39e-01 97.2% 95.9%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 44.0 4.21e-01 97.2% 96.9%
4u3qB00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.51 37.0 3.90e-01 86.0% 82.8%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 41.0 2.93e-01 90.7% 82.9%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3874056 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.68 35.0 4.63e-01 71.0% 96.4%
3736787 331.3.1.2 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.63 38.0 2.81e-01 84.1% 22.5%
5044373 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 33.0 4.13e-01 74.8% 88.3%
4324611 2008.1.1.166 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_XcyI 0.62 47.0 3.37e-01 79.4% 47.3%
3927774 223.3.1.1 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.60 43.0 3.64e-01 94.4% 43.9%
3245738 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.60 52.0 5.24e-01 100.0% 95.5%
3929050 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.58 52.0 5.12e-01 99.1% 93.9%
3760199 331.2.1.6 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › Med14_RM8 0.57 44.0 4.51e-01 81.3% 95.0%
3878170 5.1.4.549 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF28327 0.56 46.0 3.24e-01 86.9% 99.7%
3655121 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 48.0 3.21e-01 100.0% 80.4%
4467030 4041.1.1.1 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.54 43.0 3.45e-01 84.1% 70.5%
3700939 241.1.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT 0.54 47.0 4.28e-01 99.1% 91.3%
4162926 241.1.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT 0.54 47.0 4.45e-01 98.1% 98.5%
4246256 275.1.1.7 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb2_2 0.54 43.0 3.18e-01 84.1% 45.6%
3172856 5.1.4.575 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30290 0.53 41.0 3.11e-01 84.1% 44.3%
235805 241.1.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT 0.53 45.0 4.39e-01 97.2% 95.9%
3196261 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.52 41.0 3.78e-01 87.9% 82.6%
3392565 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.51 36.0 3.76e-01 86.0% 79.0%